NONHSAT029169
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT029169 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
596 nt |
Genomic location |
chr12+:65174973..65212550 |
Exon number |
4 |
Exons |
65174973..65175066,65179661..65179825,65181140..65181161,65212236..65212550 |
Genome context |
|
Sequence |
000001 GGCGGCCGCA GCGGTGCCGG CGACTCCCGC GTGCTGCAGG AGCTGCAGGA GCGACCGAGC CAGCGGCATC AGATGCTGTA 000080
000081 CCTGCGGCAG AAAGACGCTA ATGAACTGAA GACGATCCTT CGAGAGCTAA AGTACAGAAT TGGCATCCAG TCGGCCAAGT 000160 000161 TACTTCGGCA TCTGAAGCAG AAAGATAGGC TTCTGCATAA AGTGCAGAGG AACTGTGATA TTGTGACTGC CTGCTTGCAG 000240 000241 GCTGTGTCAC AGAAGAGAAC ATGGCAGAAC AGTATGCTCA Gacagtctcg tgctgttgcc aggctggaat gctggaatgc 000320 000321 agtggcgcaa tcctggctca ctcaacctct gcctccctgg ttcaagtgat tctcctgcct cagcctcaca agtagctggg 000400 000401 attacacgca cgtgccacca cgcccagcta gtatttgtgt ttttagtaga gacggggttt caccatgttg gccaggatgg 000480 000481 tcttgatctc ctgacctcgt gatctgcccg cctcagcctc ccaaagtgct gggattacag gcgtgagcca ctgcacctgg 000560 000561 ccAACTGTAA ACTCTTTGAG GGTAGCGTAT GTACTG |
Predicted Small Protein
Name | NONHSAT029169_smProtein_260:394 |
Length | 45 |
Molecular weight | 4619.3679 |
Aromaticity | 0.0227272727273 |
Instability index | 58.0 |
Isoelectric point | 5.95965576172 |
Runs | 8 |
Runs residual | 0.0187165775401 |
Runs probability | 0.0481253312137 |
Amino acid sequence | MAEQYAQTVSCCCQAGMLECSGAILAHSTSASLVQVILLPQPHK |
Secondary structure | LHHHHHHHHHHHHHLLHHHHHHHHHHHLLLLHHHHHEELLLLLL |
PRMN | - |
PiMo | - |