NONHSAT029810
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT029810 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
2126 nt |
Genomic location |
chr12+:89749211..89758266 |
Exon number |
3 |
Exons |
89749211..89750427,89753806..89754147,89757700..89758266 |
Genome context |
|
Sequence |
000001 TTAGCACAGT TATCAGAATG GACCCAGCTA CATTTCTGAT TTCTCCCTAC TGGTCACCTT TGGAACACGC TGTTCTCCAG 000080
000081 CCACAGCAAA CTGATACAAC AATGCATATT GGGCACTTAA CTGCATGATG GGTACCGTCT TGTTTCTGTG TTTACTTGCA 000160 000161 TAATTTCGGA CAGTCTTCAG AAAAAACATG TAAATTATCC CATTTACAAA GATTAAAGAA TTTGCCCAAG GGCACACAGT 000240 000241 AGCAACAGAG TGTCAAGACG TGAGGCCAAA CCCTTTACAG ACTCTTAAGG ATGCCCACAT GCACGGATTA CATAGAGTGT 000320 000321 TATGGACACT ATATTCACCT CCACGTGGTA TTCCCTGCCC ACATGTGAAG AATTTCAAGG TCAGCATTTT GAATTTTGAC 000400 000401 CTCCAGGCTT TCTCCAGCCT CACGTTTTCT GTTGCATCCT CCATGTCAAA GATCAAAAGC GAGGCTGCTT TCCCTGCTCC 000480 000481 TTTTACACAC CAGTGGTTTT CTTTGCACGC AACCCTTCAT CAGTCAAACA TTCACTAAAT GTTGCATATT TTATCTCTCT 000560 000561 TAGAATATGC CCTAGATCCT AATCTTCACA AGTGTCATTG GTTATCTAGT GCGTCAGCAC AGCACATAAG CCTAGGTTCA 000640 000641 AACCTCTGTC ACTCAGTAGT AGTCTGGGCC TCACTTCATT CATTCATTGA TGCATTTATT CTAGATTCCA GGAAAGCAGT 000720 000721 AGAGAATAAA CAGACAACAA TAACCTGCCT CACTGAAGTT TACATTCTAA TGAGGACAGT CCAATTAACA AAACAAATAA 000800 000801 TTATATATTA GAAAGTGAAA GCGCTATAGA GAAAAAGCAA GAAAAGGAAT TCGGAAGTGT GTAACATTGG GAATATATAT 000880 000881 TCCTCCCTCA AAGGACTGTG AGGATTAGAC ACAACTGAGA TGACACACGA GAAGTGTAGG GCACAAAGTC GGTATTCAGA 000960 000961 AGATGATTTT TAAAATATCA CCACTTCATT CCTGCATAAG GAATGCTGTT GGTGGTGATA TTGCCATTCC TGTGAGGCAC 001040 001041 TGAGGAAAAG CTCTCTTAGG AGATAAGGGC TGTAGTAGTT GGAAGAATTA CAGGCTTCCT TAATTCCAGA GGCCTCAGTG 001120 001121 CCCTTCAGAG GATATCATTC ATATGAAGAG GTCTGTATTT AAAAATTGGA GATAGCAGAT CATCTGTGAT CCATTCTCAT 001200 001201 GAGTGCAGAG AAGCACTCTG AGCATGAGAG CCACTCTTCT GTGACTGGAA GGAAACTTCC ATTCATGGAC AGATGAGAAA 001280 001281 GCCTGTGCTA GAAGCCACCT TGTAGAAACA TACCCAGGTT TGAGTAAACA GACACCTGCT TAGCACAGTT TCCATACTAA 001360 001361 TTTTTGCACA TATATGATTC CAAGATTATT TTTATTAAAC ATCCGATAAG TATATATCCT TTGGTATAAA TCCATCAGGT 001440 001441 TTTGCTGGAC CTACCAGAAG TTTTAGATTC CTTACCCAAA CCTCCAAAGT GTAAACCTGG CCGGGCATGG TGGCTCACGC 001520 001521 CTGTAATCCC AGCATTTTTG GGAGGCCAAG GCAGGCAGAT TTTCTTTAGG TGAAGTCATC ATAGATATTT ATACAGGGGT 001600 001601 GTGACATGAT TTCAGGATAT AATTCTGTAA CAAAGGGGGC GAGTAGACTG GAAGGGAGAG AGAAACTGGG GGCAGGAAAA 001680 001681 CCAATTAGGA AGCGATTGCA ATTGTCCAGA AAAAGGATGC AGTACCACCA CGATCATCCT CTTCCTAAAA TAATGTATTC 001760 001761 ATCAACCTGC TTAGTTTTAT TCCTCCTATT TCTGCAGCTA GAAAAATCAC TTAGCCCTCT TGTGACTCAG AATTTCTCCC 001840 001841 TATTAATAGA AGATGACAGA ATACTTATCT CACCTCACAC AGGGAGATAC TGAGAGATGC TTGCAATTGT AGCCACGAAA 001920 001921 GAGGGGGAAA TGTTATTCCA AATGCCAGTG GCAGTAATTA CTCTGGAGTA GTGAGGGGAG GGACACTGCC TTTCCTCACT 002000 002001 AACAGTCCAT TATAAAAATT TCAAACCTAT AGAAAAGTTG AAAGTTGAGT AAGAGCATCA GAAATACTCT TTGGAGGGAA 002080 002081 GCTTCTGCAG AAATTCCAAG TACTCACCAC CCAGGAAGTG GCATTT |
Predicted Small Protein
Name | NONHSAT029810_smProtein_17:127 |
Length | 37 |
Molecular weight | 4048.555 |
Aromaticity | 0.0833333333333 |
Instability index | 86.9833333333 |
Isoelectric point | 5.10809326172 |
Runs | 7 |
Runs residual | 0.013986013986 |
Runs probability | 0.0352537411361 |
Amino acid sequence | MDPATFLISPYWSPLEHAVLQPQQTDTTMHIGHLTA |
Secondary structure | LLLLEEEELLLLLLHHHHLLLLLLLLLLLEEELLLL |
PRMN | - |
PiMo | - |