NONHSAT029960

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT029960

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2639 nt

Genomic location

chr12-:93970040..93980606

Exon number

5

Exons

93970040..93970521,93972456..93972863,93976842..93977534,93979518..93980064,93980097..93980606

Genome context

Sequence
000001 GATGCTCAGT AAATATTTAT TGAATGAGTG AGTGAATGAA TGATTGAAAA AATGAATAAC TAAATGAAGG AAATAAATAT 000080
000081 AAAGACAGAG AAGTTAAAGA TAATGCAAAG TTTCAATCTG GGTTAGAGTA GAAAAACTGA AATGAAAAAA AACTGAACGA 000160
000161 AGGAAAAAAC TGAATTGTGT TCAGTAGAGT TGTAAATTAA GTACATTTTT CATGAATGTA GTAGAGCATA ACTGTCCATT 000240
000241 AAAACCCAGC ATTTATTCTG GTATTTTCGT TATACAGAAA TTTGCTACAG AAAAAGGCCT CATCCTAGAA AGAGGTTGCA 000320
000321 TTCTAAAGCA GGGTTTGCAA ACCAGTTGTC TGGAATTTAC AATAGAATTT TCCTCAGAAG TAAATTAAAA TTGGTGATTA 000400
000401 GGTACCCAAT TTATCACACA AAAGTCCATT TACTCTCTAA TGTGCCTGAA AAGCTTCAAG TCTGATTAAA AACTGGTAGA 000480
000481 AAATAATACC ATTTAATATT ATTGAAATAT TGAATGTGAA CATAATTTAT TTATCTTGAA TATTGACACT GGAGAAAAGA 000560
000561 CAGATTTAAT TTTAGCAAGT GAGAAAACCC AAGAGATGTT TGTGAAGATC AGAAGAACTT CCGGTCATTC AGAAACTTTT 000640
000641 TGAGGTTAGT AGCCCTAACT CTTTAATATG GTCAGTCCTC TGTACCCGTG GGTTTCCCAT CCACGGATCC AACCAACCAC 000720
000721 AGAACGAAAA TATTTGGGGG AGGGAAAAAA AAGCAATAAA AAATAACAAT ACAATACTAA TAAATAATAC AAACCTTTAA 000800
000801 AATATAGTAT AACAACTATT TACATAGTAT TTACATGTAT CAGGTATTAT TAAGTAATTT AGAGATGATT TAAGGTATAT 000880
000881 GTGAGGGTGT ATGCCGGTTA TATGCAAATA CTATACCGTT TCATATAAGA GATTTAAGCA TCTTCAGATT TTGGTATCCT 000960
000961 TGGCAGGGCT TTTGAGGGGG CAGGGGCGGG AGTCCTGGGA TCAATCCCTG AAGATACTGA GGGATGAATT ATGTATATTT 001040
001041 CACTTCAAGG CTTGAGACAG TCTTCTGGAA GCCCAAGAGT TGGTCTGTTA TAGAATGGTT GCCTGTCACG CCTTGGACGT 001120
001121 AATAAAACCC ATGGCCTGCC CAACGCAGCT TCAAACTGGA TATCTGGGGG ACTTTCAGCC ATTACCCAGG CTCAATGATG 001200
001201 CACCTCTGCT TGAGACATCT GATTACCCCA ACCCTCCTCC TTGACTATCA AGACCAGAGA TGTGCCCCAC TTTAAGAGAG 001280
001281 ATCCAGGAAA ACCCAAATGT GCAAGATGGA TAGATTAGGG CCGGATCATT CATGCACCAA GATTCTTTTA ATTTTACCAA 001360
001361 AGAATCTAAG AATTTCCTTA GTATATTATA GCTTTTTTGT TTCCTTTACT TTTTTCTTAA TTGCCTGACA GATGAAAATA 001440
001441 AAGCTCAATG GCACTCTTAT CTATTGAGGA TCAATTGGAA ATAAGAATAA TCTACGTAAA TGGGAAAAAT GACTTGCAAA 001520
001521 AACACACCCT ATGCCCATCA TCTTCTGGGA ACACATCTGT TTGTTAGCTG GGAAGCAGAG CGAAGACAGC CTTCCAGATC 001600
001601 CCTTGATAAT GAAAATTCAT CCAAAGGGTT ATGATGATGA TGATGATGGC TGGCATACAC CAGATTCCTG TTTCTCCATG 001680
001681 ACAACCAACA TCTAAAACCC AACTCAAAAC TCTTCGATCA TAGGGTAATG TTCAAAGATC CATAGCTAAA TCAAACAGCA 001760
001761 TGGATGGGAG GTTTTGGATT TTAAAACAGC AAACAGATTA GAAATGTTAA GGAGTTAAAA TCAACAAAAA ACTAATGTGG 001840
001841 ATCAAGACAT CATGAAATCC AGCAGAGGCA GATTTTTCAG AATCGGGTAG AGGAGGCCAA GAACTGTAAT TATCCCACAG 001920
001921 GGTATTCCAC AGGCCTGGCT TCTGAATCCC AGCGGAAGAA ATATATGATG TTAAGAGAAC TGTAGGACTT GCAGGAAAGC 002000
002001 AAAGAAGAGT CTCGGCAATT TTATCAAAGG GTAGGAGCGT GCAACTTTTA CAAATAGTAA TCCTAAGACT AAAATATCTG 002080
002081 CGTTTGAATC CTGACTCTGT CATTGATTGG CTGGGTTGTG TGCCTGTGTG TGTGTGTGTG TGTGTGTGTG TGTGCGATCC 002160
002161 AGTAAGCAGG TTTTATTACA ATTTATAACT GAATTTTCTC ATTCACACAG GGTCCACCTT TATGGTGACA CACCACAGGA 002240
002241 TTGTAGCTAT GCAGGAAAAT TTTAAAGCCA TAAAATAAAT AATGTCTGGA CTCTAGAAAA GATGGTACAT TTATAACAGT 002320
002321 TATGCAGACT AACATAGCAA AAAATAAGTG GCCACAAAAC TTTGTATTTT TCTTTAGTAT TATGCCTACT CAACTTGTAA 002400
002401 AAGACTGGCC ATGTCATAAT GTTTGTAGTT TCTAAACCAT GTTTTTGGAA ACACAGAGGA CATCAGTGTT ATGCCTATTC 002480
002481 AAATTATAAA AGACCCGGCC ACTTGACAAT GCCTGTAGTT TCTAAACCAT GCTTTCCAAA TTGCAAAGGG GGCAGGTACA 002560
002561 GCCCATAACT TTACAGAATG GCAAGTAATG TTCTACCTTT TGTTGAATAA TTGGCTTATT TCACTTGACG TAAGTTTTT
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Predicted Small Protein

Name NONHSAT029960_smProtein_890:1054
Length 55
Molecular weight 6400.5435
Aromaticity 0.12962962963
Instability index 48.0722222222
Isoelectric point 9.62420654297
Runs 8
Runs residual 0.0145438121048
Runs probability 0.0198396926338
Amino acid sequence MPVICKYYTVSYKRFKHLQILVSLAGLLRGQGRESWDQSLKILRDELCIFHFKA
Secondary structure LLEEEEEEEELHHHHHHHHHHHHHHHHHHLLLLLLHHHHHHHHHHHHHHHEEEL
PRMN -
PiMo -