NONHSAT030004
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT030004 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
588 nt |
Genomic location |
chr12-:95460704..95467279 |
Exon number |
2 |
Exons |
95460704..95461167,95467156..95467279 |
Genome context |
|
Sequence |
000001 GATCCCACAT CCCGTCGGCT TTCTTCAACC TCTCTTCCCG GAGCGCCCCC CAATCCACGA GTGGCAGCCG CGGGACTGTC 000080
000081 GCGTCGGCGC CCGACGCCGG AGTCAGCAGG GCGCAAAAGC GCCGGTAGAT CATGGCAACC ATAGAAGAAA TTGCACATCA 000160 000161 AATTATTGAA CAACAGATGG GAGAGGTATG TCTAGTTTAC GGTTGATGCA CTGGCCcacc aaacttttct aattcctact 000240 000241 aaatgcatat accaggttct ggagttccag aaataaaaga tattccctaa cttaagatag cttttcaagc tactgagaga 000320 000321 tagttgaata atcagacaat tcatagtaga atgtggtaag ttctgtgaca ggtcattgta tcaggtgcaa tgggagcaca 000400 000401 gaagaaaatt gaaaggaatg aagggaagga aggaaggaaa gaaattaaag agctgtagag tgagtaggaa tGCTTTTGag 000480 000481 ggaattcttt ttagagggta caatctgagc ctagttttgg tgggatcagt aggagttcag cATCAATACT GACATCTTCA 000560 000561 TTTTTTTAAA TGGTTGTGTC CTATTACT |
Predicted Small Protein
Name | NONHSAT030004_smProtein_131:205 |
Length | 25 |
Molecular weight | 2706.1186 |
Aromaticity | 0.0416666666667 |
Instability index | 83.6666666667 |
Isoelectric point | 4.08758544922 |
Runs | 5 |
Runs residual | 0.0267857142857 |
Runs probability | 0.0087793676029 |
Amino acid sequence | MATIEEIAHQIIEQQMGEVCLVYG |
Secondary structure | LLHHHHHHHHHHHHHHLLEEEELL |
PRMN | - |
PiMo | - |