NONHSAT030018
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT030018 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
2116 nt |
Genomic location |
chr12+:95702291..95704413 |
Exon number |
1 |
Exons |
95702291..95704413 |
Genome context |
|
Sequence |
000001 CGCATCATTC CTGGAACATC AAGAGTGTGA AGACTGAAGA TAACCTGAGG CCTACCAGAC ATCCTATATT CACCAAGATT 000080
000081 CACATTTTTT GGTATGTGTG CCTACATTTT AGCAAAAATT GGTTGGTTAA TCCTTCTAAA ATTAGAGGGA TGACATTGGG 000160 000161 TAACAAAGTC TTCCCAGCCT TTGGCATTAT AGTAATTTCT CGCAATAGAA ATTCCATACA GATATTATTG CCAGTGAAGA 000240 000241 GAGCTATTCT TGTTTATTAT CAGTTCTATA TTTTTAGCTG AAGCAACTTA GCCCTAAAAA ACCCCAAAAT CAACTTCTTC 000320 000321 CTCCAAATTA AACTCTCCCC CAAATTTAAT GGTTTCTGTT TTCTTAAATG TTTTTCTACT TGACACTGTT ATGTCAGTCT 000400 000401 CATGTAACTG AATAATTGTT CATAATTTCT GAAGAGCATT TAGTCTTTGC CATCTGGCTT CAGTGCCAAA TGATTTTCAA 000480 000481 TTCTTGTTTT TGGAGACTAA TGACTTTTTC CTTAATTTAT TATCAAATTT GCCACATTTT AGAGCTCACT TTTAGAAGTT 000560 000561 CTGCTATGGT TAATGAAAAC AAGCTAGAAT GACACAGTAG AAATTGGTTA ATACGTCACA TTTTACATCA CTATTTTGTA 000640 000641 GAAGATTTTT AGTAAGTTTC TCTATTTTTA TTCCTTGCCA CTCTGGATTT TACAAATATT CTGACCTAGT TGATCCATCA 000720 000721 CATGGTCTCA TATCACAACT GTTGCATCGC TATATTCACA TAGATGTTTT TCTGTTTAAT TTAGAAGACA GTATTTCTGA 000800 000801 AAAAGTATGA AACGACCCCA AATCCAAAAG TTATGGTGCA CAATGAAAAT GTATGCTTTT AATAATGCTG GCTTCTGCAG 000880 000881 TAGGTGTAGA CCATGTTTCA AATAACCACA GACTAATCAG AAACTCCACC TGTGAAAGGA ACTTGAAATT GTGCTATTCC 000960 000961 TCCAAGCTTA TAACACCAGC AAATTGGGTC AATAGGTTAT TCCTTTAAAA TAGGACTATG AGCCTACAGA GGCTCACTCT 001040 001041 GAAGAACTCA GCCGTGGAGT TAGTTCTGTA CTATATCCAT CACAACAGAC ATGCTTCATC CCATAGACTT CTTGACATAG 001120 001121 CTTGAAATGA GTGAACCCAT CCTTGATTTA TATACATATA TGTTCTCAGT ATTTTGGGAG CCTTTCCACT TTTTTAAACC 001200 001201 TTGTTCATTA TGAACACTGA AAATAGGAAT TTGTGAAGAG TTAAAAAGTT ATAGCTTGTT TACGTAGTAA GTTTTTGAAG 001280 001281 TCTACATTCA ATCCAGACAC TTAGTTGAGT GTTAAACTGT GATTTTTAAA AAATATCATT TGAGAATATT CTTTCAGAGG 001360 001361 TATTTTCATT TTTACTTTTT GATTAATTGT GTTTTATATA TTAGGGTAGT ACATTTCCTA CCCTACCTGA AGACTTGAGA 001440 001441 TTATAGTCTT TGGGGGGATG GGCAAAGTAC TCTCTTTTTT TGCATCTTTT AAATTGTGAT TTTTAAAAAC ACATATAAAT 001520 001521 TTTACTATCT TAACCATTTT TATGTGTATA GTTCAATGAG ATTAAGTCCA GTCACATTGG TGTGAAACAG ATCTTCAGAA 001600 001601 TTTTTTCATC TTGCAAATCT GGGACTCTAT ACCCATTAAA CAACTCCCAT TTTCCCCTTC CCCACAGCCT TGGCAACCAT 001680 001681 CATTCTACTT TTCTCTATGA ATTTCACTAC TTTAGATACC TCATATAAAT GGAATCATAC AGGATTTGTC CTTTTGTAGC 001760 001761 TGACATATTT CACTTAACAT AATGTCCTCA AGGTTCATCC ATATTGTAGA ATGTGATAGG ATTTCCTGCC ATTTTAAGGC 001840 001841 TGAATAATAT TCCACTGCAT GTATTTACCA CATTTTTTTA TCCATTCATC TGTTGGTGGA CGTTTGGGTT GCCTCCATCT 001920 001921 CTTGGCTATT GTGAATAATG CTGCTGTAAA CATGAGTGTG CAAATATCTA TAATTTTTTA ACACAGTACT TTATTTTCGG 002000 002001 TATTTAATCA TATGGAATTT TTGTCAATTA TGTTAAAGGA TTTTACAACA ACCCAACTAT AGATTTATAT ATATATGTAT 002080 002081 TATTGTTGTT CCTTCTAAGC TTAAGAAGTC TCTAAT |
Predicted Small Protein
Name | NONHSAT030018_smProtein_149:280 |
Length | 44 |
Molecular weight | 5004.9762 |
Aromaticity | 0.162790697674 |
Instability index | 57.6560465116 |
Isoelectric point | 10.5485229492 |
Runs | 11 |
Runs residual | 0.0985105827019 |
Runs probability | 0.0484495190378 |
Amino acid sequence | MTLGNKVFPAFGIIVISRNRNSIQILLPVKRAILVYYQFYIFS |
Secondary structure | LLLLLLEELLEEEEEEELLLLLEEEEEHHHHHHEELLLEEEEL |
PRMN | LLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHHHLLLLL |
PiMo | iiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTTTTTTTooooo |