NONHSAT030821
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT030821 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
895 nt |
Genomic location |
chr12-:113537317..113540904 |
Exon number |
4 |
Exons |
113537317..113537873,113538433..113538485,113539694..113539814,113540741..113540904 |
Genome context |
|
Sequence |
000001 gttataagtg ccaagatgag acgtttgaga ttccagtgga tgcctctgac ccagcctcag gatggggact caaggagggc 000080
000081 ttcctggagg aggtgctgct taaatgtgac ctgagtagag cagaagttaa gcagcggcat tggagacaga actgggagat 000160 000161 ggggCCGCCG GCTGCAGCCG TACACACTCA GCTGTCACCC TGGGGGACTG GAGTGACCCA CTGGATCCTG ATGCTGAGGC 000240 000241 CCAGACAGTG TATCGGCAGC TGCTCCTGGG GCGGGACCAG CTCAGGCTGA AATTACTGGA GGATTCTAAC ATGGATACAA 000320 000321 CTCTGGAGGC AGACACAGGG GCCTGTCCTG AGGTCCTGGC CCGGCAAAGA GCAGCAACTG CCCGCCTGCT GGAGGTGCTC 000400 000401 GCAGACCTGG ATCGTGCCCA CGAGGAGTTC CAGCAGCAGG AGCGAGGGAA GGCGGCCCTG GGCCCCCTTG GCCCCTAAGG 000480 000481 AAATGCCAGA GCTAGCCCGG AAGGAGGAGC AAGAGCCAGG GGGCCCTCTT CAGCGCATCC TGCCCCGGGA GTCTCCTGTC 000560 000561 TCCTTGGACC TCTTTGATTC TGTGGTTTGG AGGCTCCCAG AGACGTGCCT AGTCCTGTGT GCCTTGAGTC CAGAACTCAG 000640 000641 GGCATGGAAG CCCTTTGGCA GGGGCCAGCC TTGCACTGAG TGAAACTTGC CCTCTGGCTT GATTCAGACT GGAGTGGATA 000720 000721 GGATAAGGAA CCTGACTTAT TTGACTGAGA CTGGGGTCTC TACTTCACCA AACTGGCCTC TATCCATACC AAGGAGGCCA 000800 000801 GCCTGGCCCT GAGCTGCTGG ATACAGCTGG ACCTGAATTC CTGATGCCCA TGTGATGTTG TTGCCCCAGA TGGGCACTAA 000880 000881 ATGGCCTCAC TCCTT |
Predicted Small Protein
Name | NONHSAT030821_smProtein_482:682 |
Length | 67 |
Molecular weight | 7473.5909 |
Aromaticity | 0.0606060606061 |
Instability index | 92.4196969697 |
Isoelectric point | 5.07904052734 |
Runs | 11 |
Runs residual | 0.0160587915079 |
Runs probability | 0.0482728718024 |
Amino acid sequence | MPELARKEEQEPGGPLQRILPRESPVSLDLFDSVVWRLPETCLVLCALSPELRAWKPFGR GQPCTE |
Secondary structure | LLHHHLLLLLLLLLLEEEELLLLLLLLLLLLLLEEEELLLLLEEEEELLLLLLEELLLLL LLLLLL |
PRMN | - |
PiMo | - |