NONHSAT031088
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT031088 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
567 nt |
Genomic location |
chr12+:120116790..120117786 |
Exon number |
2 |
Exons |
120116790..120117307,120117738..120117786 |
Genome context |
|
Sequence |
000001 gtagctttta agtgttctca ccacaaaaac atggtaagca tgttctgcgt gtgttgatga gcttgattta gccattccac 000080
000081 aatgtgtcca tatttcaaaa caacatattg tacatggtaa atatacataa ttttatctgt caatCTTTGA AATTGATTAA 000160 000161 TTTTTTAAAA ACCCCTCTTA GGCTCACACA GCAACTGGCT GAGCCAGCAG TCACATCAGG CTTGGCTGGT GCCAGATCCT 000240 000241 TGGTAGTTGG TGCTCTCAGC AGCCACCCTG AATGGCCTCC CAGCGGGAGC TTGCTGAGTA TTTGTTGACA CAATGATTGG 000320 000321 CCCAGCCTCT GGGATCCTAA GCCTACAGCA GTTGTTCTAC ACTTTTTTCC ATTTGAATTG CATTTATAAC AGTTGGGGGT 000400 000401 ATACAATGAA AAAATaaatc ccgatttctg gcttctctta aaacatagga aggtgcggcG GGCAGCTCTG AGTGCCAGCC 000480 000481 CGGTGGCAGA TTTTCCAGAG TAGTGGTGTC TTGCCCAGTG TGATCCAGCT TTGCTTCCTG AGCCCAATCA CGTCATGCTG 000560 000561 AACCACC |
Predicted Small Protein
Name | NONHSAT031088_smProtein_113:307 |
Length | 65 |
Molecular weight | 6826.9614 |
Aromaticity | 0.046875 |
Instability index | 40.7125 |
Isoelectric point | 8.88702392578 |
Runs | 9 |
Runs residual | 0.00796875 |
Runs probability | 0.0484013425189 |
Amino acid sequence | MVNIHNFICQSLKLINFLKTPLRLTQQLAEPAVTSGLAGARSLVVGALSSHPEWPPSGSL LSIC |
Secondary structure | LLLHHHHHHHHHHHHHHLLLHHHHHHHHHLLHHHLLLLLLLEEEEEELLLLLLLLLLLLL LLLL |
PRMN | - |
PiMo | - |