NONHSAT031191
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT031191 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
5785 nt |
Genomic location |
chr12-:121134117..121141628 |
Exon number |
2 |
Exons |
121134117..121139874,121141602..121141628 |
Genome context |
|
Sequence |
000001 TGGGGCAGGG AGAAGCCATG GATCCAGTTG AAATGACCAG GAAGGGTTTT ACAGAATGAT TCCCCTAAGC AAACATCCCA 000080
000081 GAGAGAAGAA AAGCAAAAGA CACACAGCTA AATGGACAAC AGTTCCCAGC CTCGTCACAG GAGAACTCTT TGGAGCCAAG 000160 000161 TGAACCCCTG GGTCTCCTTT TTCCCACCCC ATCACTTCAG CGCTTTGAGA TCAAGTTCGA ACTCAGTCCC AACACAGAGT 000240 000241 GTCACTGCAA ATTGTTTATT AAAACACAAA GCAATGGACA GTGAAAAACA TCCTGATTTT GTACTTTTTG GTGGGAGTGG 000320 000321 GGTGGGACAT GGAAGGGGTA GGGTCAGATG GAGACAGCCC AGAAGGAAAG CCAGCTCTAT CCACCCCTAC AGCTTCCCCG 000400 000401 GCCAACCAGG TTCAAAGCCC ATCAGTTATA TCTCACTGTG CCGCTGTCAA TGCATGTTGT GGCTGCTGGC AAAGAGTTGG 000480 000481 TTTGGCCTCC ACAGAGAGAG GATGGGAAAC TAGGGTAGAA GCTACAAGGG CTAAGAACTT GATGCTTTTT CTCCAGTACT 000560 000561 TGGTACAGAA TAGAGCAGCC AGGCCCAATG TGGAAGGGTG GGCTTGGTTT CCTGACAAGC CAGGTTAGAC CAATAATGGT 000640 000641 TGAAGAGGCT GCCCTGGGCT CAGAATGGGC AGCTGGTCCT TGCCTGGGAG AACTTTGTGG AAGGAAAAGG TAAGATTCCT 000720 000721 TAAGTCCAAG GAGAGAACCA ATCCAGGGTC AAATTTCTTT TCATTCCCTG GATCACAACA CACCAGGGAA GAGAGGAGTC 000800 000801 AAGAATGTCT CTCCCTGCCA GTGCTCCCCT CCTACCTCGC AACTCGGCTC TCCCTTCCCG ACAGTTGTCC TTTGAAAGGA 000880 000881 CGGAAAGCGC ACTTCAGTTT GTTGTTGTTT TTCCTCATAC TGAAATAAAG CACTGAAGCT CAAAATAGAG GTGAGAATGG 000960 000961 AGTTCTGCTT TCCCCAGTGC TATGTGCCCC CATCTCACAA GACTGCCTGG ATGCAAGAGG TGCCAAGGCC CTCTCTGCCA 001040 001041 ACTCAAACAG GCACTACTGT TTCCTTGGCT GCCAGCACAA TCCTGGCTCC TTGTGTTTAT ACTCCTGGGG GAACCTGTCC 001120 001121 CAAGAGATCC ATCCTGCTCT TTTCCTGCCA ACCCAGCTAG TCCCCAAATC ACCTGCTCTT ATCAAGATAA TCTGGCCCCC 001200 001201 CATAGCAGGC TAGACAAAAG GCAGCTGGAA AGGACAGGCC AGACTGGAAG CAAGCCACAC AGATGCAAAG AAGAAACCTG 001280 001281 CCCTCGCTAG GCAGCTGATC TACTGGTACC AATCTAGTCT CATAACAAAA TGAGGAAATC TAGCCCTCTT GCCCCAGAGA 001360 001361 GATTTAAATA CAGAGAGTCT TAGTTTGGAC TGAAAGAGAA AAATTGCTCT GATCTTTCTA AAGCTTGAAC ATTAAGGCTT 001440 001441 CTTTGCAATT TTCTTAGAGC TCTTTGATCG TTAATTATAT CTTTCCATCG AAGAGAAGCA GATTTCTTCT GAGATTTCTG 001520 001521 AACAGTTCCT GGGTGTTTCC GGTTCTGCTT CCGTGTACTA TCACTTTGCC TTGCCTCAGT CTCTCCTTCC TCCGGGGCCA 001600 001601 CAGAAGGAGA AAGCCCAAAG CATACCCATC CTGCCCTTTA AAAAAAAAAA GAAAGAAAGA TTCGTCTCTC ACTTTGGAAA 001680 001681 GCTCACCTAC TCTCCTAGGT CCTTCTGGAG GGGCATGGAG GACAATATTC CATGTTGCCA TTTGATGCCA CTAAGGATCC 001760 001761 CCAAGGCAAG AAGACACTTG AATTATGCCA GAGTAGGCCA GCAAAGGGGA GGGAAGGGAC AGGGAAGCAG CCCCATGGCA 001840 001841 GGGACTATAG GACCCCTGCC CAAACCTGAA TCTAGAGGGA ATGCCCCACC CTGGCTCAGA GCAGGAGAGG AAAAGGCACT 001920 001921 GTGCTGACCG GGGTGGGTCC TTCCCCAACC CCTAGGGAGG GCAGAGAACC TGCTGATTCT TTCCCTGGGT TTCCCAAGGT 002000 002001 GAGCCAATTT CTAGGGAAAG GGATTTTAGC ACTAGGAAAA GGAAAATACT GCTGCTGTTT TCTGAAGTTC TCAGCTGAGA 002080 002081 TTTTAGAAAC CATATCCAGG CCTTTCCAGG AGAGGCTAGA GGCAGGAGAA GAAGGAAGAG AAATTCCTTA AAACAGAAGC 002160 002161 TTCTCCCAAG AGATAAGGAA GTCAAAACCA CAGTTCTAAA GCTGGACCAA ACAGTTCCCA GGCACAGAAA GGGGGAGGTA 002240 002241 AACCTAACTC AAACTGTGCC CTCTCATCAA AGCCTAAATG CCCGCTAACG TGATCCCAGT AGCTCTTAGG CAGGGAGGGC 002320 002321 AAGAGAACAC GAACACGCTC TCAAACCAAC AGGTGGCCCT GTGGGCAGGG CTAGTCTTCC TGGGAGTCTA ACGCCATTGA 002400 002401 CACCTGAAGA AAACTATCTT CCCAGTCATG AGAACTCGGG GTGTCGATTG AGCAGCCTCT CCTCAACAAT GGAGATTTTT 002480 002481 CAGAAAAGTG AGTCTGGTTT AAGGGACACA AATCCCACAG AGTTTCTTGG CACAATGTTT CAGTAAGCAT GAGTGAGACC 002560 002561 CAAAAACGTC CAATGAGAGA CCAACAGGCC CCTGACCTAA GTCAGAGCTA GACTGCAGAA CTCTCAGCCC AGCTCTGCAG 002640 002641 CAGACATCTG CGTCATCCTC CCAGAAATTC AACTCAGGCC ACACTTCTGG CAAAAGAAGT TTCACCCTGA CTGTCCTTGT 002720 002721 TTTCAGTCAG CTGGGCTCAG TGGGATCTAA AAACCTGGGA CAGAGTGTAG ATCCAGTAGA GGAGCCCAGG CCTCTCCTCC 002800 002801 ACGCACCCCT CACTGGCACC CCTCACCATC TCCCATACAT TCCCTATGGT GCAGCCTCTC AGTCCTAGCA CTAAGCTCAA 002880 002881 AATACAGATA AGAGAACAAA CAGTGCAAAA AGCAAAAGGT GAACAACAGA GTAATTCTTG ACACATACAA TACAAAAATA 002960 002961 AAAATAAAGA ATCCCACCCC TTTAACCTAA ACTTCATGTA CCTATATCTT GGAGGAGCCA Caaaacaaaa acaaaaacaa 003040 003041 aaaAACTTTC AAGTTCAGCA TCATGAGCCA GCTGTGACCA GCCCCAGGGA GCTCTTGTTA GCTGGATAGG CTTGGCTCCA 003120 003121 GGGGAGTCTA CCCCAGCCCC CACCATACTT CTTCCTGTTT CCTCACTTCC CCTTTAGTTT TTGTTAGCCA TAGAAAGATG 003200 003201 TTCCTTCCTT TCGTTCACAA CCAGAGAGGA AAGCGCCCAT CCCTAACCCT GAGCTCAGGG GAAAAGGGTG GGCTTGGAAA 003280 003281 CAGAGGCAGA AGCAAAGCTG CTTGGCTTAC AGTACCATTA GGAAATGGCC CCAGGAGTCA GGGTTTCCTT CTGAGACTCT 003360 003361 GAGTCACTGA AGGGATGTGT TGAGGTGGAA GGCGGGACCC CCTCCTTCCT CAGACAGACC CAGGCAAACT AACAAACAAG 003440 003441 GCAAAATGGA GGCAGCCAGT CCTCCTCCTT CATCTTGACT AACCCAATGG CAGTGGCCCA GGGCTTTGGG GAATTTCGAT 003520 003521 GGGATAGGAA CCAAAGCTAC TGCCAGAAGC CTGTTTAGTT AGGATGTCCA CTGCCCCAGG CAGGTGGTCC CCAGGACCAA 003600 003601 GGCTACAGTA CCTTATCCTT TAGAAGCAGG GGAGCTGTGT GAAGCACTAT GGGAAGTATA CCTCTGACTG CAGCCTCGGG 003680 003681 CCACAACCCT CCAGCTGCCT GACTCAATAC CCTAGCACTG AGACCCAAGT CACAGCGAAA ACAACAGGCT ACAATTCTCA 003760 003761 AACGACTAAA TGCTGGCCTG GAGTAATCAT TAAAGAGCCA AAACCCAGGA CATGAGCCCA AGAGCTACCT ATTTTGTCAC 003840 003841 ATAAGGAGCA GTTCAAATAT ACAGAGCTCT TAAAAAACAT ATCTAATAAA GCAAACTCAA AATTAAACAC ATTCTAGAAA 003920 003921 AGCGGGCCTG GCCTGAGATC CTATATTGAC TGCTCCAGCC CAAGCTGAAG CTAATCCTGC TGTCTCCCAT CCACAAAATT 004000 004001 CCTTCTAGCT TGGCTGGGTC CTCCTTCATT GTTGCCCTAA CTGGGAAATG GATGACAATG GCCAGAAAGG AGGGGACCAG 004080 004081 GGAAGCTTCA TTTCCTATAG AAATTTTTTC AGGGAATTCA AGATCGACAC TTAGATGCTA AGGTTAGCTT CAGAGCTGCC 004160 004161 AAGGCTCTGG CTGACTGGAA TTCTTTCAGT CCCATCACAC CAAGAACCTG ACTGCTACTT GGATAGAGAA ATGAAAGGAC 004240 004241 AGGGGAAGGA GGGGCATACT ATTAAGATCA ATAAGAAGCA TCGCTGGGCC TATATAGCTA ATTAGTCTAG TTCCTTGAAG 004320 004321 TAGCTCTAGG CATAAACCAA AACTGGCTGA ACTGTGACAC ACAAGAACAT GGGAATAAAT GAACATCAGA TACCAGACAC 004400 004401 TCTAAACAGT GGTCAGTCAC TTAGTAGGGC TCAAATCTCT GAGGTTGCTC TTAAGCTATG CTAACATAAG CCTTTTCTAA 004480 004481 TCCAAAGACC AGAAGAGACT TTTAAGGTCA AGTGTTCTGT TGCTGCAGGC TGGAAAGCAT CCCTGCCCCC TGGCAGCAAG 004560 004561 GCCCTACAAA GGGGCCAGTA AAGAACTGCT GGGTCAGGTC CTCCTGGCTG CTGGCTCAGA GATCCAGGGA GGGAGGTACC 004640 004641 AACAAGGTGA GGTGGTAAAG GAGAAGACAT TCAAGCAGAG AACCCCAAAT CCCCGTGTCT CCTTCCCTTC TTGGCTATAA 004720 004721 CTTAGTGGGA TGGTTGAGAG GGAGAAGAAA TTTCAAATGA GCCAGATTAA GGAAACAAAC AAACAAACAA AACTGAGAAG 004800 004801 AAATCAAGTC CCCAACAGGC ACTGAAATCA AAATGATTTG TTGTGGTAAC AAGTCAGAGG CGATCTGAGG ACCCGACATA 004880 004881 ACCGAAACGT CTTGGATGCT GGACAGTCTA TAACTGGCAC ATGCCAGGGA GACAAGCAAT GACAAAGCTC AAACACTAAA 004960 004961 GGTGGGACCA TCACTGGATT AATCCAGAAA GGCTTCCAGA TAAGGAAGCA TTTTCTTTCT TTTTTTTTAA TCTCCCTACT 005040 005041 TTTTTTTTTA AGTCTTTACC GCACAAATTC TACCCCTTCA CACACATTCT TTCAATCCCA GGACGTCTGA AGTCTTATCT 005120 005121 AGACATAACT TCAGACCGTA CCTAACTCCC AGTGCTGGTC GTCTCAGGTA ATAAGATGGC ATTTCCCTGC TGTTAATTTC 005200 005201 TAACCTAAAA AAAGGAACAG TGACTCCTCT GAGTTCAGAG TCCTTTCCAC TAGGTATACA AATGAGGATC CTTGAGCAGG 005280 005281 AAGGATCCAG TTTACCCTAA GTATCCTCAA GAGGAAAGAG AAGGCTGGGA GCCAGCCACA AAGAGAGGAC GAGGACTGAA 005360 005361 GCACGTCTGG GACCAGGTGG TGAATGAGGG CTGCTCTCTA CTCGCTCTGC CTCTTTTTGT CTCCTTTAAT TGATGTGTGT 005440 005441 TTTTTTCTCT TTGTTTTTGT TCATTAATCA TTGTGAAAAA TACAGAAACC AAAACCAATA TGGCTGGTTT CTTTCCCACA 005520 005521 CCCCTCCACC CTGTTCAGGA TAGTCATTTG TTCTCACAAC CGGCAGAGGC AGAAGAGGGT TGGAATGAAG ACTCCGAAGG 005600 005601 CCACCAGGAT GGGAAACATG AGGCTGCTGT TGTCCGAGGC ATAGGGGTTG GGTGTGCGGG GGCCTGACTG CACCCGGTTC 005680 005681 TTATTGGTCT GTTTTTTGAG ATTAGACCCT TCATCATAtt cttcttcttc ttcttcctct tctttcttct CCAATCCCGG 005760 005761 ATGAGGCTGA AGCTTTGGTA CATCT |
Predicted Small Protein
Name | NONHSAT031191_smProtein_956:1159 |
Length | 68 |
Molecular weight | 7260.4166 |
Aromaticity | 0.089552238806 |
Instability index | 66.9731343284 |
Isoelectric point | 8.37176513672 |
Runs | 11 |
Runs residual | 0.0208642650621 |
Runs probability | 0.0311140017022 |
Amino acid sequence | MEFCFPQCYVPPSHKTAWMQEVPRPSLPTQTGTTVSLAASTILAPCVYTPGGTCPKRSIL LFSCQPS |
Secondary structure | LEEELLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHLEEELLLEELLLLLLLLLEEE EEEELLL |
PRMN | - |
PiMo | - |