NONHSAT031428
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT031428 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1023 nt |
Genomic location |
chr12+:121813197..121837718 |
Exon number |
3 |
Exons |
121813197..121813619,121829773..121830032,121837379..121837718 |
Genome context |
|
Sequence |
000001 aataaaagca ggctgcggag ccagcagcga caatcggttg gggtgttttt caggtgtgtg ggtggtttag ttttttcgct 000080
000081 gtttggggcc atattgcttt tatgagctgt gacactcacc gcgaaagtct gcgaagcttc attcatgtaa gcccccgaga 000160 000161 ccacgaacct gccgagagga acgaacaatt gtagacgcgc cgccttaaga gctctaacac tcaccgcgaa ggtccgcaac 000240 000241 ttcactcctg agccagcgag accaggaacc caccagaagg aaaaaactct ggaacacatc ggaatatcag aaagaacaaa 000320 000321 ctccagacac gccgccttta acaactgtaa cactcacagc gagtgtctgc acttcattct tgaagttagt aagatcaaga 000400 000401 acccaccact tccggacaca AAAagggaga gacgtaaggc agaagaagat taCATGTACG AGTTGACAGC ATAATTCACT 000480 000481 GGCAGAATTC CAAAAAGATG CTATCAGTCC AAAAGAAAAT GATTCTGGGG AGCCATCTGT TCTCCAGCTG CAGAGATGTT 000560 000561 TCTCTAAAGT GCAATAAGTA TTGTTGAAAC CATCTTTACT GTAGCGGAAG TCAATCACAG TCTGGATTCA GATGGGAGCT 000640 000641 GGTTTAAGCA TTCAGATGAA GAGATACTTC GTCATTTCTA CCAGCCGCGT CCTAGCGAGT GCAGCTGCCG CTCCTTACCG 000720 000721 GACCCACGAG TGAGGAGCCC CGAGGTCATC ACCGAGCATG AACGCGGGAA CGTCTGGGAA GGAAATCTGA GGCCCTGCTC 000800 000801 TGACGGTCAT AACAAAGGCC TTCGAGCCAA CCGGCGTGTT CAAATTCACC ACGGCCCTTC CCGCGCTCCC CTCCCCGGAA 000880 000881 ACTTGACCAC CTAGCCCAGA AAGCCGCAGC AGCTTCCTCA GGGACGCTAT CTCCCATTTC AAACACCCAA CCGAGAAAGC 000960 000961 AGCGCCGCAG CGCGCCTTCC GCCACGCCCA GGTCCGCAGG TCTTCGCTCG GGGCGGAAAA GAA |
Predicted Small Protein
Name | NONHSAT031428_smProtein_101:193 |
Length | 31 |
Molecular weight | 3577.8765 |
Aromaticity | 0.0333333333333 |
Instability index | 103.696666667 |
Isoelectric point | 5.78143310547 |
Runs | 6 |
Runs residual | 0.00225225225225 |
Runs probability | 0.0450450450451 |
Amino acid sequence | MSCDTHRESLRSFIHVSPRDHEPAERNEQL |
Secondary structure | LLLLLHHHHHHHHEEELLLLLLHHHHLLLL |
PRMN | - |
PiMo | - |