NONHSAT031455

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT031455

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1847 nt

Genomic location

chr12-:122233194..122241680

Exon number

5

Exons

122233194..122233632,122234097..122234148,122237753..122237862,122239613..122239714,122240537..122241680

Genome context

Sequence
000001 GGGGGTCTTG GCTGGCGGGG GAGGGGGTCT CCCCGGGCTC TACCTCCCGC GGCCGGGACT ACCCTCAGAG CCGCGACCGC 000080
000081 CGCGGCGTGC GTCCCGGGCC TGCAAAACTG TTTCCAAACT gcccgggccg gaggcgggcg cgcggggccc ggggAGATGG 000160
000161 CTGGGGTCTG GGGGGCCGAG GGTGTGTGTG GACGCTGGGA GCCGCGGGGG GAGGCCGGCG TCGACTCAGA GGAGTTGCAA 000240
000241 TCGAGGTATC TGCGCTCCGG CTTCCTCCTG CGGCCCGCGA CCCCCTCCCC GGAGCTGAGC TGGGGAAGGG AGACCAGGGT 000320
000321 TCACCACGTT AGCATTCGCA TTCCTGGGAG GATGCAGCCC TCGCCTGGAC CTGGGCGATA GACGCCTTCT TCTGTTTTTA 000400
000401 TTTTTGGAGG GGAGCGCCCT GTAATTGTCC TGAACACATG CTTCCCCCCC TTCCTCCAGC CACCCGCGGA GGAGAGAGTC 000480
000481 CCCCTTTTTT GCATTTATCT TTTCCTTCCC CTTTCTTTAT TAAAGGTCCG GGAGTGGCGG CGGCCAATCA GCGCGCGGCT 000560
000561 TCCATTTTGT GAGTTCAACT CCGAGGCTCC CGGGCTTCGC GAGGACGCGT TTGCAGCCCC CTCTGCCGCT CCTCTCTGGC 000640
000641 GGCCGAGGCG CAGGAGCCGC CTCGCCGGGG CTCGGAGCTG GTGTAGCTCA TATTGGGGCT CTTTTCGGGG TTTGTAATTT 000720
000721 GGCCGTGGGT AGGTAATTGG CTGGAGCAGG GCGGCAGGGC GCGGCAGCCA ATCAGCGCGC GGCTTCTATA GGGCTTGAGT 000800
000801 TATTAGACGC TGATCTCAAA ACATCCTTCA TCAGACACGA AGGAGAGGCC AACAGATGAG GGAAGCCATT TTTCTGCAAT 000880
000881 GGAATTAAAT GGCCAAGTGG GTTTTTCCTT TGTTGCAAAT GGGGAATGTT TTTCCTTTGA CTCTACCATC CAGTTCAGGA 000960
000961 CGTCTCAGTG TGTTTAACAT TTGTCAACAG GCCCAAGGAC TCACAGTTGG AAGACTGGAG AAGACTTTTT AAAAAGATCT 001040
001041 GGATTTTTCC TTATGACTTG GAATCCATCT TTGTCTTGTA TAACTAGGTC ATAGCACACC ATTCATGTCA GCAGTTAACA 001120
001121 GTTTTGAATT CCAAAAAAAC CTAAAGCAGT AAACAGTCCT CAGCGAAGCC GCCTTTTTGC CTACCCAACC CTGGAAAGTT 001200
001201 TGCAGAAGTG GAAGGAGCAG AACGTGAGGG TGTAACTTAC AAAAAGGTTC TGGGCCGGAG AAGGGGCGAC GTTCGGGCAC 001280
001281 CCCCCGAATG GACAATCTTT CCTTCTGTCA ACGGCAGGGG CAGGCCTAGT TTGACTCTGA CAGTCCTCCC ACTAAGGAAT 001360
001361 TCCTGGTGAC TGGAAGGGGG AGTGACTCAG GCCCTCAACC TCTAGCAGAG TGCCTTGGCT CCCTCCTGTC GTCCTGGGGA 001440
001441 ACCTCGGCCC CAGCCCTGCC TCCCCAGCCA GTCACAGCTC CTCCCTGGTC ACCCTGAGGG AGCTCAGGGC CCGGCTGGTA 001520
001521 GCTGGGTTGC TCTGCTTCTG TCCCCCACTC CTGTGGAGCC TGGCAGGCAA CTCCATGATC TGACCCCGGT TACCTTGACA 001600
001601 GCCCTGCCTG GCCTCCCCTC TCATGGCCCA GCCACCCCAG AACCTGAAGA GGTTTTCTAG CTGCCGTGCA TTTGCCAGGC 001680
001681 TGGGTTACCC ACCCTACTTT CCCTGCCTGC CCTCCAGTGC TGCCAGGCCT AGTGTGCCAG CCAGCGCTCA GCCTTCAGTA 001760
001761 AAGGGTTCCC CTGCTTCCAA CCTCCATTGC ACTGCTTCCC CTAAGACTGT GACCTCCTGG AAGGCTGGAG CACAACTGCC 001840
001841 TCTCAAT
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Predicted Small Protein

Name NONHSAT031455_smProtein_437:571
Length 45
Molecular weight 4556.292
Aromaticity 0.0909090909091
Instability index 75.8613636364
Isoelectric point 10.8344116211
Runs 7
Runs residual 0.00401069518717
Runs probability 0.0339541221894
Amino acid sequence MLPPLPPATRGGESPPFLHLSFPSPFFIKGPGVAAANQRAASIL
Secondary structure LLLLLLLLLLLLLLLLEEELLLLLLLEELLHHHHHHHHHHHHLL
PRMN -
PiMo -