NONHSAT031455
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT031455 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1847 nt |
Genomic location |
chr12-:122233194..122241680 |
Exon number |
5 |
Exons |
122233194..122233632,122234097..122234148,122237753..122237862,122239613..122239714,122240537..122241680 |
Genome context |
|
Sequence |
000001 GGGGGTCTTG GCTGGCGGGG GAGGGGGTCT CCCCGGGCTC TACCTCCCGC GGCCGGGACT ACCCTCAGAG CCGCGACCGC 000080
000081 CGCGGCGTGC GTCCCGGGCC TGCAAAACTG TTTCCAAACT gcccgggccg gaggcgggcg cgcggggccc ggggAGATGG 000160 000161 CTGGGGTCTG GGGGGCCGAG GGTGTGTGTG GACGCTGGGA GCCGCGGGGG GAGGCCGGCG TCGACTCAGA GGAGTTGCAA 000240 000241 TCGAGGTATC TGCGCTCCGG CTTCCTCCTG CGGCCCGCGA CCCCCTCCCC GGAGCTGAGC TGGGGAAGGG AGACCAGGGT 000320 000321 TCACCACGTT AGCATTCGCA TTCCTGGGAG GATGCAGCCC TCGCCTGGAC CTGGGCGATA GACGCCTTCT TCTGTTTTTA 000400 000401 TTTTTGGAGG GGAGCGCCCT GTAATTGTCC TGAACACATG CTTCCCCCCC TTCCTCCAGC CACCCGCGGA GGAGAGAGTC 000480 000481 CCCCTTTTTT GCATTTATCT TTTCCTTCCC CTTTCTTTAT TAAAGGTCCG GGAGTGGCGG CGGCCAATCA GCGCGCGGCT 000560 000561 TCCATTTTGT GAGTTCAACT CCGAGGCTCC CGGGCTTCGC GAGGACGCGT TTGCAGCCCC CTCTGCCGCT CCTCTCTGGC 000640 000641 GGCCGAGGCG CAGGAGCCGC CTCGCCGGGG CTCGGAGCTG GTGTAGCTCA TATTGGGGCT CTTTTCGGGG TTTGTAATTT 000720 000721 GGCCGTGGGT AGGTAATTGG CTGGAGCAGG GCGGCAGGGC GCGGCAGCCA ATCAGCGCGC GGCTTCTATA GGGCTTGAGT 000800 000801 TATTAGACGC TGATCTCAAA ACATCCTTCA TCAGACACGA AGGAGAGGCC AACAGATGAG GGAAGCCATT TTTCTGCAAT 000880 000881 GGAATTAAAT GGCCAAGTGG GTTTTTCCTT TGTTGCAAAT GGGGAATGTT TTTCCTTTGA CTCTACCATC CAGTTCAGGA 000960 000961 CGTCTCAGTG TGTTTAACAT TTGTCAACAG GCCCAAGGAC TCACAGTTGG AAGACTGGAG AAGACTTTTT AAAAAGATCT 001040 001041 GGATTTTTCC TTATGACTTG GAATCCATCT TTGTCTTGTA TAACTAGGTC ATAGCACACC ATTCATGTCA GCAGTTAACA 001120 001121 GTTTTGAATT CCAAAAAAAC CTAAAGCAGT AAACAGTCCT CAGCGAAGCC GCCTTTTTGC CTACCCAACC CTGGAAAGTT 001200 001201 TGCAGAAGTG GAAGGAGCAG AACGTGAGGG TGTAACTTAC AAAAAGGTTC TGGGCCGGAG AAGGGGCGAC GTTCGGGCAC 001280 001281 CCCCCGAATG GACAATCTTT CCTTCTGTCA ACGGCAGGGG CAGGCCTAGT TTGACTCTGA CAGTCCTCCC ACTAAGGAAT 001360 001361 TCCTGGTGAC TGGAAGGGGG AGTGACTCAG GCCCTCAACC TCTAGCAGAG TGCCTTGGCT CCCTCCTGTC GTCCTGGGGA 001440 001441 ACCTCGGCCC CAGCCCTGCC TCCCCAGCCA GTCACAGCTC CTCCCTGGTC ACCCTGAGGG AGCTCAGGGC CCGGCTGGTA 001520 001521 GCTGGGTTGC TCTGCTTCTG TCCCCCACTC CTGTGGAGCC TGGCAGGCAA CTCCATGATC TGACCCCGGT TACCTTGACA 001600 001601 GCCCTGCCTG GCCTCCCCTC TCATGGCCCA GCCACCCCAG AACCTGAAGA GGTTTTCTAG CTGCCGTGCA TTTGCCAGGC 001680 001681 TGGGTTACCC ACCCTACTTT CCCTGCCTGC CCTCCAGTGC TGCCAGGCCT AGTGTGCCAG CCAGCGCTCA GCCTTCAGTA 001760 001761 AAGGGTTCCC CTGCTTCCAA CCTCCATTGC ACTGCTTCCC CTAAGACTGT GACCTCCTGG AAGGCTGGAG CACAACTGCC 001840 001841 TCTCAAT |
Predicted Small Protein
Name | NONHSAT031455_smProtein_437:571 |
Length | 45 |
Molecular weight | 4556.292 |
Aromaticity | 0.0909090909091 |
Instability index | 75.8613636364 |
Isoelectric point | 10.8344116211 |
Runs | 7 |
Runs residual | 0.00401069518717 |
Runs probability | 0.0339541221894 |
Amino acid sequence | MLPPLPPATRGGESPPFLHLSFPSPFFIKGPGVAAANQRAASIL |
Secondary structure | LLLLLLLLLLLLLLLLEEELLLLLLLEELLHHHHHHHHHHHHLL |
PRMN | - |
PiMo | - |