NONHSAT031515
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT031515 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
980 nt |
Genomic location |
chr12-:123004457..123011501 |
Exon number |
4 |
Exons |
123004457..123005128,123005932..123005975,123006690..123006846,123011395..123011501 |
Genome context |
|
Sequence |
000001 CTCTCGCGCG AGCGATTTAG TCTGAGGCGA AGCTTCGGAG CGGCCGGTAC TGTTGAAAGC GACAAGTGGA GGCGCCGCTC 000080
000081 TAGCGGCCGG GACTCTGAAC TATGGCGGCT AGTGATACAG AGCGAGATGG ACTAGCCCCA GAAAAGACAT CACCAGATAG 000160 000161 AGATAAGAAA AAAGAGCAGT CAGAAGTATC TGTTTCTCCT AGAGCTTCAA AACATCATTA TTCAAGATCA CGATCAAGGT 000240 000241 CAAGAGAAAG AAAACGAAAG TCAGATAATG AAGGAAGAAA ACACAGGAGC CGGAGCAGAA GCAAAGAGCG TGCTTATGCG 000320 000321 CGAAGAGACT GAACTGAAGA CGCTGCAGAC TCAGATAGCA AAATAATAAG CCTACTTCAT GATAAGGTAA CTATTAGTCA 000400 000401 TTCAAACTCC TATTTCCCTT AAATATATCT TAAATCAGTT AAGGGTTTTA ATGTTTTTTT TAAATTAATA GTAATGTTAT 000480 000481 GTTTGAAAAA CTGGTTTGAA ATAAACTTTA AAACCTTTAG AAGTTTAACC ACTTAAGACT TTTCCAGTCT GCCTCGTTAT 000560 000561 AGCAAAACCA AGGAAAATTT CTTTTCTAAG CTCCTATAGA GAACTGGCAA TGAAACTAAA ATTTAATTGT GTCTCCAGGT 000640 000641 CTCTTATTTT TCTGCAAATA ATAAATTATG TACTATGATC ATTTTCAGAT AAATCATCAT GCATGTTCCA AAATGATTGG 000720 000721 CCAAGTTTTA TTTTTAAGAA ACATTAATCG TGAGTGGAAA GAAACATGCT ATGGCCTTTT GGGAGACAGT AGTGTCTTAT 000800 000801 TACAGTGGAA AAGTGGTAGC GTGGGCATCA GAAAAACATG GGGAAGGTTC AGCTCACCCA TGTAGCTTTG TAActttaga 000880 000881 tcttagttat acataaaata aggggattaa gttagaggat cttagtttcc ttccagaatt aaaatttagt gattcAGAGA 000960 000961 TGTCTAGGAT TTTAAACTTT |
Predicted Small Protein
Name | NONHSAT031515_smProtein_101:331 |
Length | 77 |
Molecular weight | 8940.6769 |
Aromaticity | 0.0263157894737 |
Instability index | 105.807894737 |
Isoelectric point | 10.9104614258 |
Runs | 9 |
Runs residual | 0.0229885057471 |
Runs probability | 0.0391175489216 |
Amino acid sequence | MAASDTERDGLAPEKTSPDRDKKKEQSEVSVSPRASKHHYSRSRSRSRERKRKSDNEGRK HRSRSRSKERAYARRD |
Secondary structure | LLLLLLLLLLLLLLLLLLHHHHLLLLLEEEELLLLLLLLLLLLLLLHHHHLLLLLLLLLL LLLLLLLHHHHHLLLL |
PRMN | - |
PiMo | - |