NONHSAT032029
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT032029 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
2521 nt |
Genomic location |
chr12+:132146205..132149749 |
Exon number |
3 |
Exons |
132146205..132146437,132146914..132147774,132148323..132149749 |
Genome context |
|
Sequence |
000001 CAGACACCCA CCCGCGGCTG GACGCGCGGA GCCCGCCCTG GGCCTCCCTC CCCGGCTTCA GGTCCCCGCC TCGGCCCTGC 000080
000081 CCACCTGGGG CTGCGCTCCC TGCAAGTCTG CGGCCCCCAC GCGGCCCTCG GCCCCGGCGC GGGTCTTCTG CGGACGCCTC 000160 000161 CAGCCAGCTC CGGGTCCCTG CGCGGAGGAC GCTGATTCGT GTCGTTAAGC GGGTGAAGCG GGTGTAGACA GAGagcccag 000240 000241 gacagcacct ggcccgtagt aggtgccgca agaaacgctt cttgaaggaa ggaaGGAACG AACCCACGAG TATTGCAGGA 000320 000321 GGATTAAATG AAAGATCAAT TCATCCCACC TCACGGTAAT AGGCACCCTG TTTCCTCCCA GCCCCGAGAT TGGAGAGTTT 000400 000401 GTTTTCATCC TCCTGTTGTC TGAACACAGC ACAGAGCAAT CCTGAGACAC AAAGCAACGT GCCTTTCAAA Atttttaata 000480 000481 aacatggaat cttgctatgc tggccaggct ggtcttgaac tgctagcctc aagcgatcct ccctccttgg cctctcaaaa 000560 000561 tgttgggatt ataggcgtga accactgtaa ccagccTCAA GACAGGCTTT CTAAGACACA AGATTCCGCG TGTCAACTGT 000640 000641 ATCCACGGAA ACCATTCCTT AGTTTATTGT CACCGCCATT CCTAACTCTG ATGTGAAAAT CCCTGCGTTC ATCAACATAA 000720 000721 CCCAGTTAGG GTCGCACTCA TCACGGGGCC CCCATTGCCT CTGGCGCACC CCACGACTGA CATCTGCGGG GCCTTCGCGC 000800 000801 TAGGCTTCGA GTTTCAGCTT CCGCACCAGG CCTGCCTTTC TGCAGGGGCC AGGGTGGGGG TCGTGTGCTG ATTGGGCCCT 000880 000881 CTGAACCGCC ACCGCTGCAG AGGGGCTGTT CCTTCCGTCA CATCCCTTGT GCCCGAATCC ACCCTGTGTC TTCTCTTTTC 000960 000961 TCAGCAGGAC ATTTTAAAAG CCCAGACCCC CTCCTTACAG AGCAAATGTC CAGGCTTCGG AGGTCACTGT CACATCCCAA 001040 001041 GAACCCCCTT CACCAGGTGC CACTCTTGAG ACTGGACTGA AGCCCCCTGG AGAGTTCCAC TTGCCTTTGT CCTGCTGCCT 001120 001121 GAGATGAGGG CATGGACAGC CGGGTACAAG ACGGGACAGG CAACCTCGCA GTGGTGGTAA CCCTGTGCAT GAACCCTGGG 001200 001201 CCTGGCACGT GGACCTCCTG TGACCGTCCC CACAGGCCCG TGAGGCTGAG CTTGGCACTG CCCAAGACCA CACAGTCCAT 001280 001281 GCGCAGTGGA GCTGGGGTCC AGGCTGCCCA CCAGGGCAGT GACTGCAATG GTGGCAGCAG GGGACAGTCA CCATGGTGAG 001360 001361 CTCAAGCCAG GCGCTGCACT GACCTTGAGG GAGGGCTCCA TGCTTCCCCT TCCCACAGCT GCAGTGAGGG CTAGGAGAGC 001440 001441 AGGGTCGGCT GCAGGCTTGA GTCCTGGGGT GCCTCTGGGC TGACGGGCCC TGCCTGACCT GCTCCTCCAG TGCCCCAGCC 001520 001521 CTGCCCCACC CACGTCCCCT CCTCTCACTG CCCCCTGGCC CACTCCGCTG CGGTCTCAGT Gccttcccag gctgggcatc 001600 001601 atctgatggg aggaaaatga gggccccaga ctctgtgtca tcctggcagg acccctcccc tccCATGGCT TTGagcccat 001680 001681 gagatggcct tggacaaagc ggcaatgggc ccttcctgag acacagtgcg gccatctact gggaaactgc ccagtgtgac 001760 001761 tctgatgact gtgatgtgaa tcccacagca aagttgagca gtgcgcaacc tgggctactg cacctggcag ccctgGCTCC 001840 001841 Tcctcctctg cctcttcctg ctccttcatt ctcccccaga gctctaattg tcactgagat tttatgtttc gtttaacaaa 001920 001921 tgactgtctc cccgcttgaa cagaacctcc atggggggag ggaagagtgt ctgttgtata aatagttgta tttcagtgca 002000 002001 taaaacagtg cctgcctcaa agggaggact cagtcaatat ctgttgaatg aatgaatGAT TGCCTGGGTC AACGAATGAA 002080 002081 TGGCTGAATG AATGATTTCT CCTTTCCCTC GGCACTGTCT GGAGTCCCCA GGACAGGCAT GGGCAGCAGT CGCTGGTCTG 002160 002161 TGGCCTGTCC CACTGGACTT GGGGTTCTCA TGCTTGGTCT GGGCGGAGAT CACCCACCAG GCTCCCAGGT CGATCCTCTG 002240 002241 CTCATGGGAA GCTGCGTCCG GCCCAGCTGC CAGGAGCTCA CTGCAGGGTG GAGGGAAGAG CAGGGACGAT CTGCGAGCGC 002320 002321 CTGAACACCA CACAAGAGCC GAGGAGCCGC TGCTTAAAAT GCAGGCGTTG AGAGGAGTTT CGCCTCCTTT TTTGACTTGA 002400 002401 ATATGAGATT TCCGAGCAGC CATGACGAGT TGGGTTGGTG GAAGTGGGGA GTCCGTTCCT CAGTCAGATG GAGGGGGTCC 002480 002481 CCTTGGATCT CCTCTCGGGG CTTGAACCCT GATACTTCAA G |
Predicted Small Protein
Name | NONHSAT032029_smProtein_2087:2323 |
Length | 79 |
Molecular weight | 8050.0469 |
Aromaticity | 0.0512820512821 |
Instability index | 64.508974359 |
Isoelectric point | 5.56341552734 |
Runs | 7 |
Runs residual | 0.0439337085679 |
Runs probability | 0.0332727685669 |
Amino acid sequence | MNDFSFPSALSGVPRTGMGSSRWSVACPTGLGVLMLGLGGDHPPGSQVDPLLMGSCVRPS CQELTAGWREEQGRSASA |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLLEEEELLLLLEEEEEELLLLLLLLLLLLLLLLLLLLLLL HHHHLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |