NONHSAT032141
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT032141 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1252 nt |
Genomic location |
chr12-:133483691..133484942 |
Exon number |
1 |
Exons |
133483691..133484942 |
Genome context |
|
Sequence |
000001 GTGGTCTCTG CGCAGTGCGT CGTGTGGGGC GGCCGACCCC GGCCCGGGTT TCCCTGCTCG TTTTCGTCCG GGCGGGCGTC 000080
000081 TTGGTTCCCG TTCCAGGCCA GCCCCATCCT AGGTCGCTGC TTCATCCAGC GCTTGGGGCA TTTGTGTCGT TGGCGTTGTT 000160 000161 TTCCTCTTAA CTACAAACTT TAAATGTGTT CATCTACTCG TGACGGCGAG TTTAGCAGAC TTTCATTCCC AGAAGACGTG 000240 000241 TCACACGATC TGTATATTTT TCATACAGAA ATTGACGGAC GTCGTTACTT CTAAATTTCC ACAGGGGCTG GTTCATCCCG 000320 000321 CGGCTTTACC TAGAGAAAAA CGTCTGAggc cgggcgcggc ggctcccgcc tgtaatccca acactttggg aggccgaggc 000400 000401 gggcgaatca cgaggtcagg agttcgagac cagactggcc aacatggtga aacctcgtct ctactaaaaa tacaaaaaaa 000480 000481 aaaaaaaaaa aaaaaaaaaa aaaaaatagc cgggcgtggc ggcgcatgcc tgtaatccca gctactcagg aggctgaggc 000560 000561 aggagaatcg cttgaacccg agatggtgcc actgcactcc agcatgggcg atagagcgag actccgtctc aaaaaataat 000640 000641 aataaaataa aaaCcatgga caatgggagg agaacatcac acaccggggc ctgtcggggg tggggggcca ggggagggat 000720 000721 agcatcagga gaaatacgta atgtagataa ctggttgatg ggtgcagcaa accaccatgg cacgtgtata cctatgtaac 000800 000801 aaacctgcag gttctgcaca tgtaccccag aacttaaagt ataattttaa aaagagaGAG AGAAGCGTCT GAGCGTTTCT 000880 000881 CAGGGACGGC GGGTGGCAGC CAGGACGGGC TGGGGCGGTG AAGTGCGGGG CGGGAAGCGA CGCGTGCGCC TCCTGCGCTG 000960 000961 GCTTCTGTGA AAGGAGGGAC TGATTGGAGA TCACTGCTGA AAAGTGGACT ACGCATCAGT GAATAGTTAG TGAAATATGA 001040 001041 GCTTCTACAT TCAAAACCAT TTGTGCTTTA AAGATTTTGT TTCACCATGG TATCGTATTT ATCTGAATCC TATGTTGCTT 001120 001121 TTGCTTTGTA ATCTGAATTG TCTGTCACTC CCCCAGTCTC AGTTTTTTGT TAACTGTTCA ATATTCATAG AAATGTCTCT 001200 001201 ACATGGGACC CTTTAACAGA GAGAGTAATC TGTCATAGCA AGTATTTCCT GA |
Predicted Small Protein
Name | NONHSAT032141_smProtein_776:871 |
Length | 32 |
Molecular weight | 3606.1892 |
Aromaticity | 0.0967741935484 |
Instability index | 44.5870967742 |
Isoelectric point | 10.2977905273 |
Runs | 5 |
Runs residual | 0.0399865591398 |
Runs probability | 0.0475711005123 |
Amino acid sequence | MARVYLCNKPAGSAHVPQNLKYNFKKRERSV |
Secondary structure | LEEEEEELLLLLLLLLLHHHHHHHHHHHLLL |
PRMN | - |
PiMo | - |