NONHSAT032141

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT032141

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1252 nt

Genomic location

chr12-:133483691..133484942

Exon number

1

Exons

133483691..133484942

Genome context

Sequence
000001 GTGGTCTCTG CGCAGTGCGT CGTGTGGGGC GGCCGACCCC GGCCCGGGTT TCCCTGCTCG TTTTCGTCCG GGCGGGCGTC 000080
000081 TTGGTTCCCG TTCCAGGCCA GCCCCATCCT AGGTCGCTGC TTCATCCAGC GCTTGGGGCA TTTGTGTCGT TGGCGTTGTT 000160
000161 TTCCTCTTAA CTACAAACTT TAAATGTGTT CATCTACTCG TGACGGCGAG TTTAGCAGAC TTTCATTCCC AGAAGACGTG 000240
000241 TCACACGATC TGTATATTTT TCATACAGAA ATTGACGGAC GTCGTTACTT CTAAATTTCC ACAGGGGCTG GTTCATCCCG 000320
000321 CGGCTTTACC TAGAGAAAAA CGTCTGAggc cgggcgcggc ggctcccgcc tgtaatccca acactttggg aggccgaggc 000400
000401 gggcgaatca cgaggtcagg agttcgagac cagactggcc aacatggtga aacctcgtct ctactaaaaa tacaaaaaaa 000480
000481 aaaaaaaaaa aaaaaaaaaa aaaaaatagc cgggcgtggc ggcgcatgcc tgtaatccca gctactcagg aggctgaggc 000560
000561 aggagaatcg cttgaacccg agatggtgcc actgcactcc agcatgggcg atagagcgag actccgtctc aaaaaataat 000640
000641 aataaaataa aaaCcatgga caatgggagg agaacatcac acaccggggc ctgtcggggg tggggggcca ggggagggat 000720
000721 agcatcagga gaaatacgta atgtagataa ctggttgatg ggtgcagcaa accaccatgg cacgtgtata cctatgtaac 000800
000801 aaacctgcag gttctgcaca tgtaccccag aacttaaagt ataattttaa aaagagaGAG AGAAGCGTCT GAGCGTTTCT 000880
000881 CAGGGACGGC GGGTGGCAGC CAGGACGGGC TGGGGCGGTG AAGTGCGGGG CGGGAAGCGA CGCGTGCGCC TCCTGCGCTG 000960
000961 GCTTCTGTGA AAGGAGGGAC TGATTGGAGA TCACTGCTGA AAAGTGGACT ACGCATCAGT GAATAGTTAG TGAAATATGA 001040
001041 GCTTCTACAT TCAAAACCAT TTGTGCTTTA AAGATTTTGT TTCACCATGG TATCGTATTT ATCTGAATCC TATGTTGCTT 001120
001121 TTGCTTTGTA ATCTGAATTG TCTGTCACTC CCCCAGTCTC AGTTTTTTGT TAACTGTTCA ATATTCATAG AAATGTCTCT 001200
001201 ACATGGGACC CTTTAACAGA GAGAGTAATC TGTCATAGCA AGTATTTCCT GA
[back to top]

Predicted Small Protein

Name NONHSAT032141_smProtein_776:871
Length 32
Molecular weight 3606.1892
Aromaticity 0.0967741935484
Instability index 44.5870967742
Isoelectric point 10.2977905273
Runs 5
Runs residual 0.0399865591398
Runs probability 0.0475711005123
Amino acid sequence MARVYLCNKPAGSAHVPQNLKYNFKKRERSV
Secondary structure LEEEEEELLLLLLLLLLHHHHHHHHHHHLLL
PRMN -
PiMo -