NONHSAT032196
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT032196 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
817 nt |
Genomic location |
chr13+:19308220..19309036 |
Exon number |
1 |
Exons |
19308220..19309036 |
Genome context |
|
Sequence |
000001 GGAGAGAAAA GCCATACATG TCCCAAATGT GGGAAAGCCT TTACTTATCA GTCATTTCTT GTAAGACATA TGAAAATTCA 000080
000081 CACTAGAAAG AAATCTTATG AATATGTCAA AAGTGGCAAA GGCTTTAGAT ATTCCCTACA CCTTAATAAA CATTTAAGAA 000160 000161 AGAACATTCT GGACAAGCCC TATGAATGTA AGGAATGTGG GAAAACCTTC AGCAAGCCTC AAAACATGCA CATATAAGGA 000240 000241 GTCATGCTGG AAAGAAACCC TATAAATGTG ACAAATGTGG AAAAGACTTT GCAAAGACAT CAGAATTAAA AGCCACCTTA 000320 000321 AGAGATACAA TAGTGAGAAG CCCTGTGAGT GAAAGGTGGA AAATCATCAT TAATTTTTCA CCATACTGAA CATGTGAGGA 000400 000401 GGACACACTG GAAGGGAGCT CAATGAGTTA ACATGCATGA GAACATCTTT CCTGAACTCT CATATCTTAC GGAAGTGTGA 000480 000481 AAAGAAACCC TGTGAAGGTA AACTCTATGG AAAGCCTTTC ATTCATCTTC ATTCATCTTG AGTAGCTATT TGTTCTCACA 000560 000561 CTGGAGAGAA GCTATGAAAG TAAGGAACAT GAAAAAAGCC TCAGTGTTGC CTCAGACTCA TAGTTCATAC AAGAACGCAC 000640 000641 ACTGCAGAGA CTGCTTATGG AAGTAAAAAA TGTAGAAAAG ACCTCTTTAA ACACTTAACC CTCCTGTTAC ACATGATTCC 000720 000721 GCACTCTGGA GGGAGACTAC AATGGGAATA AATATAATAA AGCTTTCAGT TCCAGCTCTT CACTTATTGG GCATGAATGA 000800 000801 GCACATAGCA GGACTGA |
Predicted Small Protein
Name | NONHSAT032196_smProtein_194:388 |
Length | 65 |
Molecular weight | 7445.5261 |
Aromaticity | 0.09375 |
Instability index | 59.9328125 |
Isoelectric point | 9.79925537109 |
Runs | 9 |
Runs residual | 0.00796875 |
Runs probability | 0.0233861312293 |
Amino acid sequence | MWENLQQASKHAHIRSHAGKKPYKCDKCGKDFAKTSELKATLRDTIVRSPVSERWKIIIN FSPY |
Secondary structure | LHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLHHHHHHHHLLEEELLLLLLEEEEEE LLLL |
PRMN | - |
PiMo | - |