NONHSAT032362
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT032362 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
2100 nt |
Genomic location |
chr13+:21872312..21906571 |
Exon number |
3 |
Exons |
21872312..21872501,21875558..21875757,21904862..21906571 |
Genome context |
|
Sequence |
000001 GGAAACGCAG AGCGCGCGCT CCAGGTAAAG GCTGCTACGC CCAGGACAGG GTTCTCACGG TGGAGGAAAG GACTTCTGCG 000080
000081 GGATACCACG CTGTGCGCCA AAAAGCCGGG CGGCTTCGGA GCCAGAGCAG CGGCTCTGCG GCGCAGGCGG CGGGTCGGGG 000160 000161 CAGCCTTGAA GCCGGGATCC GGCCCGAAGG GGTCTTTTTG GAGTTCCTGA GCTCAGTGCC CCAGAAGGCA CATACTTCAT 000240 000241 ATGAAATATG AAGGATTTCA TACTGCACAA GAAAAAGCCT TGAGAAAGAC AGAATTGCTT GTGGACCGTG CGTGTTCCAC 000320 000321 CCCACCTGGG CCCCAGACCG TGCTGATCCT TGATGAGCTC TCGGATTCCT TGTGCAGAGT GACCGACTTG TTTCGAAATG 000400 000401 ACCAGGCTGG CAGTTGGCTG AGCCAGTCTC TTAGAACCCT TTGAAGCACT GGATGCAGGC TGATGAGCTG CCATAAACGT 000480 000481 CTTTGAGTCC CAACACTGCT CAGGAACTGC ATATCATACC AAAGTCTGCC TGTGTGATCC TTTAATTTGT GAATGTAAAA 000560 000561 ACTGAGGTGG GAGGCAAATA CTGATGTTCT CAAAGACCCG TCTCAGCTAT TCCATTCAAA CAGAGCCCAG AATCTTCAAA 000640 000641 ATTCTGCTTC TTCAGCTTAC CTCCTGTCTC AGGCTGGTTC CCCAGAAGCA TCCCAGAGAT GCAGATTTGT GAGAAAGTGA 000720 000721 TGTGTTGGGC AGTGTCCCCT GCAGGGAAGT GAGGATGCAA GACAGTGAGA AGGAAGCCAA GCAAGAGTGC AATGTCAAGC 000800 000801 AAGGTCCCGT GCTTGCAGGG CACTGGCTCC TCCCACAGAG GAGATTTGGA GACTGAGAGC CCCTCCCTCC ATTGGTCAAG 000880 000881 GGCCATCTCA GAGGGATGCA TGTTTCTAGG TATCCCCCAC TCTCTCTGCA CACAGGTAAA GGAGACTCCA GAAGCATGAG 000960 000961 GGCAGCCCTC TCACAAAGAA GCATGGGTTC TGGATACCGA GAGTAAAAGC AAACGTGGAG CCAAGGGGTG TGAAAATGGG 001040 001041 AAAGGGACCC AAGGAAATAG AGTAGTGCAT CCACCATGAG TAAGTGCCAC AGTCACTGGG TCAGCACCTG CTGTGTCCAA 001120 001121 CACCATGCTA AGTATCGTGG AGAGGAGAGA AGTTACTAGA CTTCCCTGCT GTCATCCTTA ATGGACTATT GTCTCTTCCC 001200 001201 TAGACACCTC AAACTGGGAT TTAAGGTACA TAAGCTCTCA GAAATGGCTT CCTGGAATTA TGGCCATGAA CATCAGTGAA 001280 001281 CTGTTAGGGT CCGTAGTTAC ATCTGGAAAA TGACTGCCGT TTCAATACAC AGGATTAGTT ACAATAACAG CAACAGCCAT 001360 001361 AATAATAATG TGGCAGAGAC TAGCTTGATG CTCATCACAT CTCTACCTGG GCACATAGCA AAGTTTTCTA TTCCAGCTCC 001440 001441 CACCCTGGAT CTCGGGTCCT AGTTCTCAAC AACGAAATGC TTCCAAGCCA AGTTAAAGCA GCCACAACTT TCAAACGAAA 001520 001521 ACCTAAAGAT CCTGTGTTGA AGACAGTGGC ACCTTAAAAT GCAAGGGCAG TATCCTTGAG TCCTCAGGTC ACCAGAAAGC 001600 001601 CACCCGATCA GGACCATCGA CACTAGACTC TGTGTTAGTG AGAAACAAAC TTGTGTTAAG CCATCATGAT TTTAAAGTTG 001680 001681 TTAGCAGTCA GCTTGCTCCA ATAGGATGAA CACTAATAAA CATAGCGGTA ACAACCTGCT GGGTAGTATC ATTATTCTCA 001760 001761 CTTTGTTGGT GAGGAACTTG AGGCCCAAAA TGGTCAGAAA GTTAGCAGAT GGCAGAGCTG GTATTTCAAG TCTATTTTTT 001840 001841 AATCCCTATC TTGCACTCCT TGGTCACGTA AACCTTGTGT GAATATGTTT GATGCTTTAA TGGAGCAAAG AGGAGAATAT 001920 001921 TAAAATACCA GGTTTCTTGG GTGGGATGTG GAGTGAGGAG GAAGAACACA AAACGGAAAG GCTCCACGCA TCAGAAGCCA 002000 002001 AGCTTTGGGC ACTCCACAGT TTTGCTAAAG ACTTCCCTGT CTGCTCACAT CTGGTCTGTT CCCCAGTATC CTCACTGTAT 002080 002081 TAAAGTTGTT TCTTTGTCAT |
Predicted Small Protein
Name | NONHSAT032362_smProtein_791:958 |
Length | 56 |
Molecular weight | 5914.619 |
Aromaticity | 0.0363636363636 |
Instability index | 64.8527272727 |
Isoelectric point | 5.79217529297 |
Runs | 7 |
Runs residual | 0.0242424242424 |
Runs probability | 0.0301309713075 |
Amino acid sequence | MSSKVPCLQGTGSSHRGDLETESPSLHWSRAISEGCMFLGIPHSLCTQVKETPEA |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHLLLLEEELLLLLLLLLLEELLLL |
PRMN | - |
PiMo | - |