NONHSAT033221
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT033221 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
525 nt |
Genomic location |
chr13-:37525835..37533585 |
Exon number |
2 |
Exons |
37525835..37526306,37533533..37533585 |
Genome context |
|
Sequence |
000001 AGGATACAAA GTGATATTAT GATTTATGAA TACAATGTAG CATAATTAAA TCAATTTTTT TTATCACTAG GTGGATATTA 000080
000081 ATTAGGTACC TGCAAACCAC TATGCAAAGC TAAATAAGAA ATAAAAATTT TTTTTATGGC CGAGCACCAT GCCTCATGCC 000160 000161 TGTAATCCCA GCACTTTCGG AGACCGAGGG GGTGGATCAC CTAAGGTCAG GAGTTCAAGA CCAGTCTGGC CAACAGGGTG 000240 000241 AAACCCCGTC TTTACTAAAA AATACAAAAA GATGGCCGGG CGTGGTGTCA GGCACCTGTA ATCCCAGCTA GTCAGGAGTC 000320 000321 TGAGGCAGAA GAATTGCTTG AACCCGAGAG GCAAAGGTTG CGGTGAGCCA AGATTGCACC ATTGCACTCC CGCCTGGGCA 000400 000401 ACGAGTGAAA CTCCATCTGA AAAAATAAAT AACTAAAAGT GTTTTTACTC CAAATGTCCA CAGTCAATCC AGAGCCATTT 000480 000481 AAAAACTATA TCTGTACATA TATCCAAAAG TATAAAGATC CCAAC |
Predicted Small Protein
Name | NONHSAT033221_smProtein_155:310 |
Length | 52 |
Molecular weight | 5389.9423 |
Aromaticity | 0.0196078431373 |
Instability index | 76.7137254902 |
Isoelectric point | 5.53826904297 |
Runs | 9 |
Runs residual | 0.0222286934576 |
Runs probability | 0.0212369231977 |
Amino acid sequence | MPVIPALSETEGVDHLRSGVQDQSGQQGETPSLLKNTKRWPGVVSGTCNPS |
Secondary structure | LLEELLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHLLLLLLLEEELEELLL |
PRMN | - |
PiMo | - |