NONHSAT033320
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT033320 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
947 nt |
Genomic location |
chr13+:40762765..40769177 |
Exon number |
3 |
Exons |
40762765..40762857,40762951..40763018,40768402..40769177 |
Genome context |
|
Sequence |
000001 ATCGCTGACA TGGAAACCCA GTGGAGGCTA AAGAAAGGAG GGCCCTCTCT CCTAGAGAAG GCTCAGTAGG CTCCCGAGGA 000080
000081 AAGGGAAGGA GCAACTTTTT CCGTTGGCGC CCAATGCACC ATAAGCGTTA TGTGTGTGTA AACACACACG GGGGTGTACA 000160 000161 CAGGGGTAGG GACATATTTC CCTCAAATCA ACTCCCTCTG AATCACCCTA TTTGGAGGGA GACACTATTC TCCATTTCCG 000240 000241 CTCGGCCACT TCCAGCCTCA CCCGCTCTTT ATAATCTTCA GTGAGGAAAT GCCTCTCACA GTCACTCTTC CTTCCCTACC 000320 000321 ATGGCACCGA ACCACAGATT CCCAGCATTG AACAATGGCC ATGGAAGATG TATCTGGTTG AGTTTGTTGT TTGTGTTTTT 000400 000401 TTTCTTTTCC TTTTTCTTAA TAGAATTCCT TCAATTACAC GTATGTTTTC AGCAGCCGGG CCAATCCTCC TCCTCACAGG 000480 000481 GGTGAGGTCA GCAAACCCAG GAAGCTCTCA GAGCCAAGAA AGCCTCAGAT CCAGGAGGAA GTAGTTATGG ATGCCCATAG 000560 000561 CTGAAGTGCT CTGTGTCCAC TGGAAGTAAA AGGAGCAGGT TCCTGCCGAA GAATGTACAG ACGACGTGAA ATCATGTGTG 000640 000641 GCTACACTGA AGCTAAAGGC TGCCAGCCAA CCATAGCCAG TTGGGGATAT AAACCTCTAA AAACCAAAAC TGGGGAAAAA 000720 000721 TGGCTCCCCA TTTTCTGAGG TACTCTTGGA GCACAAGCTG AATGAAAACC AATCATCATT GCCCTGCCTA GCATGAAGCA 000800 000801 GAATGAAAAG AAGGCAGATA ATATTTCCTC CCCTGAACCA CTCATCCATA TCTGCTCTAT TCAGATATTT GTGCCTAGGC 000880 000881 AACTGCACCC ACCCCTCTCA GCATTTACCC ACAGATCCTC AAAACCAAGC CCTAGCACAA TCGACTC |
Predicted Small Protein
Name | NONHSAT033320_smProtein_113:283 |
Length | 57 |
Molecular weight | 6444.3328 |
Aromaticity | 0.0892857142857 |
Instability index | 60.6089285714 |
Isoelectric point | 10.2744750977 |
Runs | 6 |
Runs residual | 0.0461553473849 |
Runs probability | 0.0471942530767 |
Amino acid sequence | MHHKRYVCVNTHGGVHRGRDIFPSNQLPLNHPIWRETLFSISARPLPASPALYNLQ |
Secondary structure | LLLLEEEEELLLLLLLLLLLLLLLLLLLLLLLLHHHHHEEELLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |