NONHSAT033362

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT033362

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

431 nt

Genomic location

chr13-:41482295..41495847

Exon number

6

Exons

41482295..41482348,41485870..41485941,41486933..41486995,41488151..41488241,41495610..41495667,41495755..41495847

Genome context

Sequence
000001 GAGCTGCTGA GCGCGATAGT AGCAGCTCCG GCGGCAGCAA CATTGACTAC GAGGAATGGC GGCGGCTGCC GCAGGACCTG 000080
000081 CAGCATCCCA GAGGTTTTTC CAGAGCTTCT CAGATGCTCT AATCGACCAG GACCCCCAGG CGGCGTTAGA GGAGCTGACT 000160
000161 AAGGCTTTGG AACAGAAACC AGATGATACA CAATATTATT GTCAAAGAGC TTATTGTCAC ATTCTTCTTG GGAATTACTG 000240
000241 TGtgcagtgg cacaatcttg gctcactgca acctctgcct cccaggttca agtaattctc ctgccGATAT GTGAATACCA 000320
000321 TTAAAAAAAA CTATGCTGCT TCTCTAGAAA CTTTTATAGA AGGACAAAAA TTAGATAGTG CAGATTTTAA TTTCAGTGAC 000400
000401 TGAATTAAAA GGTGTCAAGA AGCTCAGAAT G
[back to top]

Predicted Small Protein

Name NONHSAT033362_smProtein_182:313
Length 44
Molecular weight 4574.4313
Aromaticity 0.046511627907
Instability index 49.3558139535
Isoelectric point 5.94793701172
Runs 8
Runs residual 0.0287431408414
Runs probability 0.031354884296
Amino acid sequence MIHNIIVKELIVTFFLGITVCSGTILAHCNLCLPGSSNSPADM
Secondary structure LLHHHHHHHHHHHHEELEEELLHHHHHHHLLLLLLLLLLLLLL
PRMN LLLLLLLLLHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLL
PiMo iiiiiiiiiTTTTTTTTTTTTTTTTTTTooooooooooooooo