NONHSAT033364
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT033364 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1023 nt |
Genomic location |
chr13-:41486023..41495910 |
Exon number |
3 |
Exons |
41486023..41486859,41495610..41495667,41495755..41495910 |
Genome context |
|
Sequence |
000001 TGATGTTTCT GCAGAAGTTT TCCCCCTTGG TCGGTGGCGG AGCTGCTGAG CGCGATAGTA GCAGCTCCGG CGGCAGCAAC 000080
000081 ATTGACTACG AGGAATGGCG GCGGCTGCCG CAGGACCTGC AGCATCCCAG AGGTTTTTCC AGAGCTTCTC AGATGCTCTA 000160 000161 ATCGACCAGG ACCCCCAGGC GGCGTTAGAG TAGAGACGGG GTTTCACCAT GTTAGCCAGA CTAGTCTCGA TCTGCTGACC 000240 000241 TCGTGATCCA CCTGCCTTGG CCTCCCAAAG TGCTGGGATT ACAGGCATGA GCCACCATGC CTGGCCAAAA ACCCATCTTT 000320 000321 TTCTACATAG TTGCTGTTGC TGATGTAAAG AAGTCTCGTG AACTCAATCC AAATAATTCC ACTGCTGTGC TGAGAAAAGG 000400 000401 GTATGCAATA GCTACTCTTT TTGTTGAGCT TGGACTGTAA ATAATAGATG TTTAATTTGT TGAATGAGTT CATTGTAAGC 000480 000481 TTTATAAGTA GTAAAATTAT TTATACATAT TATAGCAGAG ATATGATTCA ATTTTAAATA TAAAGTTATA GTTCTATTAT 000560 000561 TTTGTTAACC ATAATATGTG ATAGGAGATC TATACTTAAT ATATTTTAAA ATAGTGATGA TTGAAATAAC TGCAGGGTAT 000640 000641 AGATGAAACT GATGCATTTC ACATTCCTTT TTTGTTTATC ATTTGGAATT TACTCTATTT AACTGACTGG TGAACATCCT 000720 000721 ATTATTCAAC CAAGCTGAAT AGGCTACATT TAATGCTATG AAAGCTCTGT ATCTATGTGC TTTATATCCC ATCTTGTTTC 000800 000801 TGTTGATAAG TGTAACTTTA TTCTTTAAGT AAGAAACTGC TTTAATTCCT TTGTATAATT ATATTTTGGA ATAAGCAAGT 000880 000881 ATGTATAATT AAAGTGAAAT TCCTTCTGAA GTAAGTTCTA AAATTGAATT TTACTGGAAA TTATACTAGA TGTTAACAGT 000960 000961 ATTTTAGAAA GTCTCTTGGC TTACTAACAT ATGCTTAAAA TAAATTTTTT CTTTCAACAA TAG |
Predicted Small Protein
Name | NONHSAT033364_smProtein_2:160 |
Length | 53 |
Molecular weight | 5798.3576 |
Aromaticity | 0.0961538461538 |
Instability index | 85.7423076923 |
Isoelectric point | 6.53192138672 |
Runs | 7 |
Runs residual | 0.0157540199913 |
Runs probability | 0.043606631842 |
Amino acid sequence | MFLQKFSPLVGGGAAERDSSSSGGSNIDYEEWRRLPQDLQHPRGFSRASQML |
Secondary structure | LEELLLLLLLLLLLEEELLLLLLLLLLLHHHHHHLLLLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |