NONHSAT033424
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT033424 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(S) |
Length |
547 nt |
Genomic location |
chr13+:42630767..42631602 |
Exon number |
2 |
Exons |
42630767..42631141,42631431..42631602 |
Genome context |
|
Sequence |
000001 TTCCTTCTGA TGATTGTACC CATATCCCTT TCACAGTGGA TTAAAATGGG TGGGTTCCAG ATGCCTTGCT TTCGGTAGCC 000080
000081 CTGTAGCTTC TTGGGCAGTG AAACTTTAAT CTACAGCATG CAATCATGTG TGTGTGCAGG CAGACAGGCT CCTTACTTCT 000160 000161 CTTGGCCTCT CTCTCCTTCT CCTTCCCTTC GCTCTTTTCT CTCTCCCTTA GATTCCTCTT TTCCTCTCCC TTATTTCCCC 000240 000241 CTTCTTCCTG CTCCTGCCTT TATTCGTTTG TTTAATCCAT GAGCATATCT CTCATCAATG TTTTAGGTTT CATCATGCCG 000320 000321 TTTTGCATTT GGATCCTACG TTTTTAGGGA CAGATATATG ACTGCACATT TGAAATATTT TTACCTAGCT AGAGAATGAA 000400 000401 AACGACAGGA ATTTTTTGGC CTACTTTTCT CCATCTCACT ATTTTATGTA GGTAAGAAAA AGTGCAAGAG TTTTATCTGA 000480 000481 GCAGGCACGG TGATTTGAGT TGTATTGTTC CTCGACACTC TTGTAGTACT TTAAAATTAT GTGATAT |
Predicted Small Protein
Name | NONHSAT033424_smProtein_125:274 |
Length | 50 |
Molecular weight | 5388.3677 |
Aromaticity | 0.163265306122 |
Instability index | 68.1040816327 |
Isoelectric point | 8.52081298828 |
Runs | 9 |
Runs residual | 0.0216216216216 |
Runs probability | 0.0345345345346 |
Amino acid sequence | MCVCRQTGSLLLLASLSFSFPSLFSLSLRFLFSSPLFPPSSCSCLYSFV |
Secondary structure | LEEELLLHHHHHHHHHHLLLHHHHHHHHHHHHHLLLLLLLLLLEEEEEL |
PRMN | LLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLL |
PiMo | iiiiiiiiiiiiTTTTTTTTTTTTTTTTTTooooooooooooooooooo |