NONHSAT033558
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT033558 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1851 nt |
Genomic location |
chr13-:45911312..45915290 |
Exon number |
3 |
Exons |
45911312..45911523,45912795..45914319,45915177..45915290 |
Genome context |
|
Sequence |
000001 AGCGCCGCTC CGGCTGCACC GCGCTCGCTC CGAGTTTCAG GCTCGTGCTA AGCTAGCGCC GTCGTCGTCT CCCTTCAGTC 000080
000081 GCCATCATGA TTATCTACCG GGACCTCATC AGCCATGGTC AGTAGGACAG AAGGTAACAT TGATGACTCG CTCATTGGTG 000160 000161 GAAATGCCTC CGCTGAAGGC CCCGAGGGCG AAGGTACCGA AAGCACAGTA ATCACTGGTG TCGATATTGT CATGAACCAT 000240 000241 CACCTGCAGG AAACAAGTTT CACAAAAGAA GCCTACAAGA AGTACATCAA AGATTACATG AAATCGTAAG TGATACTGGC 000320 000321 AGTACCTAGC TGATGTCTAG AATCTTACAG GATTTAAAGA TTGGCTAACT TTTGAGGTTC TTTCGCAGTG GGTATACTTT 000400 000401 TGTGAAAGTC CTTGCTTTTT TATTAATGAG TTCACGGAAA AGAGTGGTTG CTTTTCTATA ATATGAGCAT ACTGAAGCCT 000480 000481 GCAGTCTGTT TCCGTTTAGA ATTAGAATAG TATTTTGAAA ATAGTCAACA AGAAATGTAA ACATTCTTGA AAGATACCTT 000560 000561 CTGTGAACTA GTAATTTCTT AACAGCTGGT TGCCTTTTTC AGTGTTTTCT TTTTTTAAGC TTGGATATTT TTTACTTTAA 000640 000641 AAATTGATTT TACTGAAAAT TCAATACTTC AACCTGTTAA TGAAATGTTG TTTTAGAATC AAAGGGAAAC TTGAAGAACA 000720 000721 GAGACCAGAA AGAGTAAAAC CTTTTATGAC AGGGGCTGCA GAACAAATCA AGCACATCCT TGCTAATTTC AAAAACTACC 000800 000801 AGGTAAATAC CTTAAGTATC TGGATCAAAG GATTGTACAA TTTTAACTGC AAGAGCAAAA ATTAAGTTGA TTAATCTTCA 000880 000881 ATTCTATACT AGTATTCCAG GTGTAGAAAG TGGCTTTCCC AGCTCGCAGG TGTTTCCAAA TCTTGTCTTC TGATTGAAAA 000960 000961 TTTGCTTCCC AGATGACATT TCTCAGTTTT TCTTTTTGTG AATTGCTTAA CCACCTAAGT GTTCTTTCAG TTTTTTGCTT 001040 001041 ACAATTTTAA TGTGTCTCAT TGCTACTGGT CCTCCTTCTA ATGTATCTGA GCTTGTTAAT TCTACTTTTG GAAAATGTCA 001120 001121 GTGGCTTTCC CTTTCCTCTA ATTTTCCAGC TTCATGCATC CCCTGGCCAT AAGATACTTC CAGACTGTAT GATATATTCT 001200 001201 ATCACTGTCA GCCTTATGTT CCCTGTGGTT GACTATATAA GCACGCTTTA GGGTTTGGGA TTGTATTTAG GATTGAGAGT 001280 001281 AAAGGTTTCC TGAAAGCCTA GTGTTCCTGG ATTGCTCTGT ACGTTATTTT TCTATTTAGG TCACTATTAA GGTGCCTTAA 001360 001361 TCCAGTGAAC AGATGTCTAT GATAAGTGAG CATCAGAGCT TTTGGGTACT GAAGTTTTGA TTTTTGTGGT GGTCTAAACC 001440 001441 TTCCCTTGTA CTGTAGTTTG TTTTGAATGG CATGTATTTG TATGTAATAG TCTAATTCTA GGTATTTTGT TTGCTTCCCA 001520 001521 AGTTCTTTAT TGGTGAAAAC ATGAATCCAG ATGGCATGGT TGCTCTATTG GACTACCGTG AGGATGGTGT GACCCCATAT 001600 001601 ATGATTTTCT TTAAGGATGG TTTAGAAATG GAAAAATGTT AACAAATGTG GCAATTATTT TGGATCTATC ACCTGTCATC 001680 001681 ATAACTGGCT TCTGCTTGTC ATCCACACAA CACCAGGACT TAAGACAAAT GGGACTGATG TCATCTTGAG CTCTTCATTT 001760 001761 ATTTTGACTG TGATTTATTT GGAGTGGAGG CATTGTTTTT AAGAAAAACA TGTCATGTAG GTTGTCTAAA AATAAAATGC 001840 001841 ATTTAAACTC A |
Predicted Small Protein
Name | NONHSAT033558_smProtein_1049:1171 |
Length | 41 |
Molecular weight | 4283.9216 |
Aromaticity | 0.1 |
Instability index | 46.4475 |
Isoelectric point | 5.74591064453 |
Runs | 7 |
Runs residual | 0.00302419354839 |
Runs probability | 0.0497892850835 |
Amino acid sequence | MCLIATGPPSNVSELVNSTFGKCQWLSLSSNFPASCIPWP |
Secondary structure | LEEEELLLLLLHHHHHHLLLLLEEEEEELLLLLLLLLLLL |
PRMN | - |
PiMo | - |