NONHSAT033770
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT033770 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
646 nt |
Genomic location |
chr13+:50526012..50526657 |
Exon number |
1 |
Exons |
50526012..50526657 |
Genome context |
|
Sequence |
000001 gtgggagtgt agcagtgagg acgaccaaag gtcactcttg ttgccacctt ggtgttggta ggttttagct ggcttcttta 000080
000081 ctgcaacctg ttttatcagc aaggccttta tgacctgtat cttgtgccga ccttctatct catcctgtga cttagaatgc 000160 000161 ctgtctggaa atgtagtcca gtaggtttca gcctcattta cccagcccct attcaagacg gagttgctct ggttcaaatg 000240 000241 cctttgacaC AGCCTCTCag acccacctta gacttctaaa ctctagaact ataatatgag aaaactgtgt tgttttTTGT 000320 000321 TTTGTTTtta catttacggg tttattataa aggatattac aaaaaataca catgaagaga taggtagggc aaggtatgcg 000400 000401 ggaaggggtg cggagcttct atggatgcac ctccctggat gcaccaccct ccagaaacct ccagctatcc agaaactcac 000480 000481 tgaaccttgt cctcttgggt tgtaatggaa gcttcatgac atcagcattc cttcccccag ggtatagggt ggtactctct 000560 000561 catgagaagg tcttaagatc tataatcaga caggttgggg aacattagag tggaaggagg gtgggaggtc agaggcctgc 000640 000641 ccctga |
Predicted Small Protein
Name | NONHSAT033770_smProtein_395:607 |
Length | 71 |
Molecular weight | 7776.915 |
Aromaticity | 0.0714285714286 |
Instability index | 50.5372857143 |
Isoelectric point | 9.83099365234 |
Runs | 11 |
Runs residual | 0.0123055162659 |
Runs probability | 0.044426779721 |
Amino acid sequence | MREGVRSFYGCTSLDAPPSRNLQLSRNSLNLVLLGCNGSFMTSAFLPPGYRVVLSHEKVL RSIIRQVGEH |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLLEEELLLLLEEEELLLLLLEEEEELLLLLEEEELHHHHH HHHHHHHLLL |
PRMN | - |
PiMo | - |