NONHSAT033958
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT033958 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
803 nt |
Genomic location |
chr13+:52506091..52508047 |
Exon number |
2 |
Exons |
52506091..52506175,52507330..52508047 |
Genome context |
|
Sequence |
000001 CTGGAACCTA TGATCAGGCA AGGTTCTAAA GTACGTAGTC TGTGTCAATG GAGATGTCAC AATGTCTATT TCCCTTTGAA 000080
000081 GGaagGAAAA CTTCTATTCA AGGTAGAAGG ACAATAAGAG TGAAGCCTTC ACAGCTGACA GACACTGCTT GTCCattggc 000160 000161 tatgtcatcc tgggcaaagt cctcagcctc ttggagcctg tttccttgcc tgtaaaatgt ggacagtaat agctaccctg 000240 000241 ctggttggtt gggaggatta gacgtaatct atcaaaagtg ctgctaaaac tgcccctggc aagtaaTGGA CAATGAAAAA 000320 000321 AATCACTAAA ACTATTTTGT GTGGGAGAAA AGGGTTTCAC CCAGAATTTA ATCCAACTCT ACTAGTTTGC TCCCAAAGGG 000400 000401 TTCTGTCAAT CACAACCAAC TTCAGAGTCT AAAACTGAAC CCGTTCTGCT GCTCTGAGAG CCACTGCCAG GTAAACAGAT 000480 000481 GCTCCCTTCG GGGTGCTGTG GCCACTCCTT TTCTGAAGCC CCTGGGCAGC GTGCAGAATG CAGGCTCAGG GAGGCTGTGT 000560 000561 TTTCCTCCTA TTTGGGCAGT ACCATTTCCT CCAAGCCACA CAAGGCCAGG CGCTAGTCAC ATGAATTCTC TACTGAACCC 000640 000641 CACGAGGTGA CAGTCAGAAG ACTGAAAACG AAGCCCCTTG GGCCGTGCAG GGAGGCTCCT GCACACATAC GTTTCCCATG 000720 000721 GGGCAAACGT TTCAAGCACC ACAGGCTGGG CAGGGATATG GAAGGACGTC CTGAATCGCG AGAACCTACA CCCCACAGGA 000800 000801 AGC |
Predicted Small Protein
Name | NONHSAT033958_smProtein_47:214 |
Length | 56 |
Molecular weight | 6168.1564 |
Aromaticity | 0.0909090909091 |
Instability index | 72.6181818182 |
Isoelectric point | 9.49627685547 |
Runs | 7 |
Runs residual | 0.0242424242424 |
Runs probability | 0.0479092537917 |
Amino acid sequence | MEMSQCLFPFEGRKTSIQGRRTIRVKPSQLTDTACPLAMSSWAKSSASWSLFPCL |
Secondary structure | LLLLEELLLLLLLLLLLLLLEEEEELLLLLLLLLLHHHHHHHHLLLLLLLLLLLL |
PRMN | - |
PiMo | - |