NONHSAT034070
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT034070 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
869 nt |
Genomic location |
chr13+:57888873..57890043 |
Exon number |
2 |
Exons |
57888873..57889599,57889902..57890043 |
Genome context |
|
Sequence |
000001 ACATGACAGA TGATGCTGTG TCCTTCAACA GGGACTTCTG GCAGGTGGGG TGGTCACAGC CATCTCTAAG GCAGCAGGAG 000080
000081 CACCTATCGA GTGGCTCAAG CTGCTGCTGC AGGTGCAGCA TGCCACCAAG GAAATTACCA CAGATAAGCA GTACAAGCAC 000160 000161 ATTATAGACT GTGTGGTCTG TATTCCCAAG GAGGAGAGAG TCCTGTCCTT CTGGCGTGGT AACCTGGCCA ATGTCATCAG 000240 000241 ATATTTCCCC ACCCAGGGGC TCTCAACTTC GCCTTCGAAA TAAGTACTAG CAGATCTTCC TGGGTAGTGT GGACAAGAGG 000320 000321 ACCCACTTTC AGCACTATGT TGCAAGGAAC CTGGCATCAG GCGTGCGCTG GGGCCACATC CTTGTGTTTT GTGTACCCTC 000400 000401 TTGATTTTGT CTGTACCAAT CTACCAGTGG ATGTGGGTAA AGCTGGAGCT AAAAGGGAAT TCAGAAGCCT TGGTGACTGT 000480 000481 CTGGTTAAGA TCTACAAATC TAATAGGATT AAGGGCCTGC ACCAAGGCTT TACCATGTCT GTGCAGGGTA TTAGCATCTA 000560 000561 CCCAGCTGCC TACTTCAGTA TCTGTGACAC TGCAAAGGGA ATGCTTCCAG ATTCCAAGAG TACTACATCA TCATCAGCTG 000640 000641 AATGATTACA CACAGCCTGT CATTGTCATT GCAGGGTTGA ATTCCTATCC ATTTGACACT GTTCACTGCT AAATGTCGAT 000720 000721 GCAGTCAGTA CACAGGCATT TTTGACTGCT GAAGGAACAT TGCTCGTGAT GAAGGAGGCA AAGATTTTTC AAGGGTTCAT 000800 000801 GGTCCATTGT TTTCAGTGGC ATGAGTGGTG CTTTTGTGCT TGTCTTGTAT CATGAAATCA AGAAGTACA |
Predicted Small Protein
Name | NONHSAT034070_smProtein_2:166 |
Length | 55 |
Molecular weight | 6077.7788 |
Aromaticity | 0.0740740740741 |
Instability index | 63.3777777778 |
Isoelectric point | 7.68768310547 |
Runs | 8 |
Runs residual | 0.0145438121048 |
Runs probability | 0.0334746511218 |
Amino acid sequence | MTDDAVSFNRDFWQVGWSQPSLRQQEHLSSGSSCCCRCSMPPRKLPQISSTSTL |
Secondary structure | LLLLLLLLLLLLEEELLLLLLHHHHEEELLLLLEEEELLLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |