NONHSAT034093
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT034093 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(S) |
Length |
1583 nt |
Genomic location |
chr13-:60411809..60413392 |
Exon number |
1 |
Exons |
60411809..60413392 |
Genome context |
|
Sequence |
000001 TTAGATGTCT TTGTGTAACC AGAGATCATT CTGTAGTGCC AAATTACAGA AAGTTTAACC TTTGCCTTCT TGCAGGGAAA 000080
000081 TTTATCAAAG TGTCTGTCAA TCATGAATAA TACACAAATG TCTGTCTGTC TGTCTGTTTG TTTATTTATT TATTTATTTA 000160 000161 TTTTTTGAAA CCCAGGCTGG AGTGCGGTGG CATGATCTTG GCTCACTGCA ACCTCTGCTT CCCAAGTTCA AGCAATTCTC 000240 000241 CTGCCTCAGT CTCTCAAGTA GCTGGGCCTA CAGGCACGCA CCACCATGCC CAGCTAATTT TTTTGTATTT TTAGTAGAGA 000320 000321 CAGGGTTTCA CCATATTCGC CAGACTGGTA TCGACCTCCT GACCTCAAGT GATCTGCCAG CCTCAGCCTC CCAAAGTGCT 000400 000401 GGGATTATAG GCGTGAGCCA CCACGCCCAC CCACAAATGT ATGATCATTA ATTTCTATTT TTTTCCTTTT TATCAGCTTA 000480 000481 GATAATAGTA TGTTCTCTCA TCTTTTCCCT GTCATATACC TTATTTCCTT CTGATGTACA TGATGAATTG AAAGGATATT 000560 000561 AAAACTCAGG TTGAGGAAGT TTGACTCTAA ACTCATGATG TGATTTAGAT ACCTTTGAAA TGTCTGAGGA AGCAGATACA 000640 000641 AGACTTCATA AACGTGTTTA ACTAGTCAGC TTAACTTCAA GAATTGGCAT ATATTATAAA TTAGTTTGTG CTCCATAAAA 000720 000721 TTTAATATTT CCTTTAGAAA TACTAGATGG TTATAAAATC AAAATGGAGT TTATTATAGT CACTACTTGT ATTGATATTT 000800 000801 TCCTAACCCA AATAAATCGG TATGTATGTG TGTATATACA TACACACACA CACACACACA CATATATAAT TAATAGCATG 000880 000881 AGGCTTGTGT CCTGTTTAAG GTTTCTTTTG TATTCAATTA TCTTTATTAT CACTAACTTT GTAGCTTAAT CTCTAATGAG 000960 000961 TAACTGAAGT AATAAACTTT TATTTCCTGA AAGTAATGTT GAGTTGCTTT GCAAACCATT TTATGAAATT ACAGACTGAT 001040 001041 ATCTTTTGTG TTGTAATAAA ATATTACTAC AATGCATTAT TAAAATCCCA TATGGACAAA TGAATTCTGT ATGAAAGATA 001120 001121 ACTCACTTCT AAAATGAGCT CTTATAAATA GACACTCCTA ATATCTTAAA CTGAGGTACT TGAAATAAAA TGACTATTTT 001200 001201 TCCTCTTTCT ACCTCTTCTC TCCTGAGATT TAGTGAATCA CAAAATTAAT ATTTGGCTTG TCATAGATTT TATTGTATAT 001280 001281 GCTTTCAGCT TAATTGTGAA CTAGTTGAGT TTTAGCTTCC TTCACTGTCT CTGTCGGGAA ATATCATAAA AATATACTCC 001360 001361 AGCAACAATC AATTCAGGCT AACGTGTTTG TTTCCTTTTG TATCTTGCCA CCCATCCAGT TTCTTATTTC ATTAGGGAGG 001440 001441 ATGCCTTTAT CACCCTACTG AGTAAGGCTT TTTTTTTTTT TTCTTTTTAA GTAAAGGTGA AATCTGTATT CATCAAAAAT 001520 001521 TTTTTTGTAC TACCTTCTCA TATGACAAAG TGTGCTTTCT AAAATAAATA TATTATTGCA GTT |
Predicted Small Protein
Name | NONHSAT034093_smProtein_191:313 |
Length | 41 |
Molecular weight | 4284.8515 |
Aromaticity | 0.1 |
Instability index | 46.1875 |
Isoelectric point | 6.88031005859 |
Runs | 8 |
Runs residual | 0.0219758064516 |
Runs probability | 0.0255917682388 |
Amino acid sequence | MILAHCNLCFPSSSNSPASVSQVAGPTGTHHHAQLIFLYF |
Secondary structure | LLHHHHLLLLLLLLLLLLHHHHLLLLLLLLHHHHHHEEEL |
PRMN | - |
PiMo | - |