NONHSAT034193
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT034193 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
869 nt |
Genomic location |
chr13-:65883987..65885085 |
Exon number |
2 |
Exons |
65883987..65884653,65884884..65885085 |
Genome context |
|
Sequence |
000001 TGCTGCTAGC GACATTCAAA CTGTGCTCCA GGAGCTCCTA CAGACACATG CGCAACATGA AGGGGCTGAG GCAACAGGCT 000080
000081 GTGAGGGGGC ATCGGGCAGG AGCTTAACCG GAGGGCCCTG GGGGCCCCAC CCCAAGCGCT TGGATTAACC AGGTTCCGCG 000160 000161 GCGGAGCTCT CTGCTTCGTT CTCTGCTGGA AGAGACTCTC TACTCTCTAC AGTGACCAGG AGCTGACCTA TCTCCAGCAG 000240 000241 TGGGGAGGAG GCCATGCAGA AGGCCTTGGG CATCCTTAGC CCTCGGCAAC TACGAGGGCT GGAAGAAGGA GAGCCAGCAG 000320 000321 GACAATGGGG ATAAAGTGAT GAGTAAAGTG GTTCCAGATG GGGCAAGGTG TTCCGGCTGG AAGTCGTGGT GGACCAGCCC 000400 000401 ATGGAGAGGC TCTACAAAGA GCTCGTGGAG TGCATGGAGG CAATGGGGGA GTGCAACTCC AATATCAAGG CGATCAAGGT 000480 000481 CTTGCAGAAG ATGATCAGAA AAGATACATT CATTGCCCAT GAGCTGGCTG CAGAGGCAGC AGGAAACCTA GTGGGGCCTT 000560 000561 GTGACTCTGT GAGCATGTGC TGTGCCAAGC GTCAAGGCTC CACCTGTGTG CTGGCTGGCA TGGCCACAGA CTTCGGGAAC 000640 000641 ATGCCCGAGC AGAAGGGTGT CATCAGGGGG AGCATGGTCC CACTTGCATG GTGCTTCACC TGGTGACTGG AAGTCCCTCC 000720 000721 AAGACCAAAC TTACATGACT GCTCAGCATC GACCTCAAGG GGTGGCTTCC CAAGAGCATC ATCAACCAGG TCCTGTCCCA 000800 000801 GACCCAGGTG GATTTTGCCA ACCACCTGCA CAAGCGCCTG GAGTCCCACC CTGCCTCTGA AGCCAGGTG |
Predicted Small Protein
Name | NONHSAT034193_smProtein_338:493 |
Length | 52 |
Molecular weight | 5928.6289 |
Aromaticity | 0.137254901961 |
Instability index | 82.4058823529 |
Isoelectric point | 12.0067749023 |
Runs | 9 |
Runs residual | 0.0222286934576 |
Runs probability | 0.0331213566508 |
Amino acid sequence | MSKVVPDGARCSGWKSWWTSPWRGSTKSSWSAWRQWGSATPISRRSRSCRR |
Secondary structure | LLLELLLLLLLLLLLLEELLLLLLLLLLHHHHHHHHLLLLLLLLLLLEELL |
PRMN | - |
PiMo | - |