NONHSAT034225

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT034225

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

3007 nt

Genomic location

chr13+:68599997..68628150

Exon number

6

Exons

68599997..68600178,68603707..68603877,68605817..68605851,68610323..68611278,68617558..68617845,68626776..68628150

Genome context

Sequence
000001 AAGAACCTTT TATTAACACA ACAATGATAT TTTAAAAAGG AAGAATAATA ATTTCCAAGA AAAAGTACAG GAATTTATTT 000080
000081 TATGTCTTTT TGAATTTAGA CAGAGAATTA TTTCATAGAC ATCATTTAGA CAAAGTTAGA CTGGCCTGAA TTTAACTGCA 000160
000161 GGTCCTGAGA CTTATTATTA AGGGTCATAT TTGCCAATGT CTGGTGAGAA ATAGACTGGG AAGATGAAAA GCATCAAAAG 000240
000241 ATTTCTAAGG GCTACCAAGA TTATTGAGGG GATACTGAAG AACATGTTTT TTATTTAAAT ATTTCCTAGG ACTGACCTTC 000320
000321 ACTCTTTTTT CAGTGAATCT ACCATTAAAA AGGGGCTTGA GTTGCTTCAA AGACTGAGTC CCTTAAATgg tacctcatct 000400
000401 attacactca ggagcagcta cagctagagt caccaagaag ggtcgctgac atggtagttg atgctagcag gtcagctggg 000480
000481 aggtcagctg cggctttctg gcagagtatc tacatgtggt ctctctctca aggtgacttg gacttcaaac aggatggtac 000560
000561 ccatgtccca ctggagaaca actcaagcat caatattcca aaatttgtga tgcttcaaga ttgattgagg atcaatcaca 000640
000641 gtttcccaga actggaaagg tcctactttt cccctgctct acttgttaag ctgcctccac agcctgctca tgttcaaggg 000720
000721 cctggagaaa taaaatgttt cttcatgaaa gcatggcaat gtcacattgc agaagtgcat gtgggaataa acatattgtt 000800
000801 gtggccaact ttggaaaata taaATTCTCA AAATCACTTT GGAAAGGGTT TCTCTTTTGA CAGAAATCAA AAGGTAACCA 000880
000881 TCTAAAAGCA Cttctccttt cattctgggc acagagctgg ataatatttc taatttctgt aactcttagg aatggctata 000960
000961 tcacttacat ttagccaatg gaatgcacac acaaatgtgt attccacccc ctggtctgag ccatagttct ccgcagtgat 001040
001041 atccctcata ttatttctct tttcacttta ctattgtgac aatgcctagg gaaacctagg gaggcatatg ttaaagttgg 001120
001121 cagaatttct gtgaccctga gtctaatttg atcctcaatg actTTCATCC CTGTGttgag tgtgagcaaa atctatcaat 001200
001201 aggatgagat agtacttcca tgagtacgtt atagtttata gcaaatgaga tttttacagt gtaattagag tTGGAAATCA 001280
001281 CTGCTTTTTA ACTGTGTCAA ATGAGTCATT AAACTTGTCC TCTGTGTAAT TTTTGTTGTT TTTTGAAGAA TCTGTGGCCA 001360
001361 TCCTGGAAAT AAACAGAGTG ACATGGTGAC AATTGtggat cctctccttt gggataatgc actgtgtatc ccattgcaag 001440
001441 tgcttctcag acatcagtgc aacgacctct tcagtaatct gacctaaaat gtaagagact tgagagcaaa gatcatgttt 001520
001521 tgttcattat tttactccta gtacctagga cagtccccac cagcaaatgc ctgttcagtg atggatATGC TAAAATCTCC 001600
001601 TTTATTATAG ATGCATTTAT TTCATGGAAA AAGGAACTGT TGAGCAACTG ATTTTTGATT ATTTCCTGAG TTGTTCTGCA 001680
001681 GGCTTGAAAG GATAGTTTCT TGTTGGTCAA ATCACAGAAA AGTCTTATAC AAGAATTATC ATCGGGTCAA GTTCTCAGAC 001760
001761 TTACATTGTA ATTAATTGCT TAGCCTCATT ACTTCCACAC TATATAATAG TTTTACTCTT TGTTCTTTCT ATTAAACTGG 001840
001841 TTTTACTTTA GAATTTTGTT TCACTGTAAT GAATGCCATA AGAATATTCT TTAATTCGAT CATTATTATT ATTATTAttt 001920
001921 tgagacggag tctcacacta tcgtcggggc cggagtgcag tggtgtgcaa tctcggctca ctgcaacctc tgcctcctag 002000
002001 gtacaaggga ttctcctgcc tcagcctccc gagtagctgg gattacaggc gcctgccacc atgcttggct aattttttgt 002080
002081 atttttgaag agacggggtt tcaccatgtt ggccgggcta gtccccaact cgtgacctcg tgatctgccc acctcggcct 002160
002161 cccaaagtgc tgggattaca ggcatgagcc accgcgccca gccTCGGTGT TTATTTTTAC AAACAAGATA GCTCACATTT 002240
002241 CCCTCCAACA CCATTTTAAA ATAAAGCTTG TCATTTCTAT TTGACCTTTT GTTATCTCTT CCTGATTTTC TGAGAATGAT 002320
002321 TTATACTAAA TATTATATCT TTTATATTGT GTACATATAT ATGTTATTTA TAatcccata tctgaatatc tgaattccaa 002400
002401 aatactccaa aatctgactt tttgagcaca gcactgacat gacactcaaa ggaaatgctc tttggagcac tttggatttt 002480
002481 ggattttcag attagggata ctttacggtt tcaaaatctg aaaatctctg aaatctgtaa catttctggt ctccagtgtt 002560
002561 ttggattggg aatagtcaat ctgTAACATA CATGCATATT ACACTGTGTT TTCTTTAATT AAAGTAATTG CATTAATTTG 002640
002641 TCTAAGCTAG GGATGTATCA AAAGTACATA TTTCATTTTG ATCCTTAAAT CAATTTTGAC ATATTTCTTC TTATGATTAA 002720
002721 ATACACATGA TTCATAGAAG AAATAAGGTC CTCCACTGGG ATCTTTTTGT TTTGTAAAAG ACTTTCATTA TACAGctctg 002800
002801 ttggctattt atccagaccc agctcctgtc ataaaccttt atgctttatg ttacagtaat aatgaattat ttgcaattcc 002880
002881 taaaatatca caattGCATT ATATAATTCC AATTGTTGGC Attgaagcca aggactgtga tttttccata gttattgtct 002960
002961 cagcaactag cagtatggtg gcataaatat ctgttgaaAC AACAAAC
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Predicted Small Protein

Name NONHSAT034225_smProtein_1868:1999
Length 44
Molecular weight 4651.4544
Aromaticity 0.046511627907
Instability index 75.7023255814
Isoelectric point 11.524597168
Runs 7
Runs residual 0.0054873268879
Runs probability 0.0428243369421
Amino acid sequence MNAIRIFFNSIIIIIIILRRSLTLSSGPECSGVQSRLTATSAS
Secondary structure LLHHHHHHHHHHHEEEEHHHHLLLLLLLLLLLLLLEEEEELLL
PRMN LLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLL
PiMo i??????????????????????????????????????????