NONHSAT034308

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT034308

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

814 nt

Genomic location

chr13+:74024988..74027974

Exon number

3

Exons

74024988..74025041,74026751..74026898,74027363..74027974

Genome context

Sequence
000001 TCTGAAGCTC TGTTGGGCTC AAACCAAGAA ACACAGGTGG TCTTACCGAG CCACACAACT TTTTGGAAAC TTTTATTAAT 000080
000081 TTTTTGGGGG TGCCCCATTG TTCAGAGTCC TCTGGTTGCA TTTACAAGTG TAATAGAAAA TGACAGCCCT GTTATCCTTT 000160
000161 CTTAAAATGT CAAAGACCAC ATAAAACAAA CCTCATTCAC AGTATGCGGT GCTTGGTTTT TTGTCCTTGC GATAGTTTGC 000240
000241 TGAGAATGAT GGTTTCCAGC TTCATCCATT TCCCCACAAA GGACATGAAC TCATCGTTTT TTATGGCTGC ATAGTATTCC 000320
000321 ACGGTGTATA TGTGCCACAT TTTCTTAATC CAGTCTATCA TTGTTGGACA TTTGGGTTGG TTCCAAGTCT TTGCTATTGT 000400
000401 GAATAGTGCC ACAATAAACA TATGTGTGCA TGTGTCCTTA TAGCAGCATG ATTTATAATC CTTTGGGTAT ATACCCACTA 000480
000481 ATGGGATGGC TGGGTCAAAT GGTATTTCCA GTTCTAGATC CCTGAGGAAT TGCCACACTG ACTTCCACAA TGGTTGAACT 000560
000561 AGTTTACAGT CCCACCAACA ATGTAAAAGT GTTCCTATTT CACCACATCC TCTCCAGCAC CTGTTGTTTC CTGACTTTTT 000640
000641 AATGATTGCC ATTCTAACTG GTGTGAGATG GTATCTCATT GTGGTTTTGA TTTGCATTTC TCTGATGGCC AGTGATGATG 000720
000721 AGCATTTTTT CATGTGTTTT TTGGCTGCAT AAATGTCTTC TTTTGAGAAG TATCTGTTCA TATCATTTGC CCACTTTTTG 000800
000801 ATGGGGTTGT TTGT
[back to top]

Predicted Small Protein

Name NONHSAT034308_smProtein_329:442
Length 38
Molecular weight 4124.9351
Aromaticity 0.108108108108
Instability index 46.5432432432
Isoelectric point 6.79669189453
Runs 9
Runs residual 0.0634763203571
Runs probability 0.0426406798956
Amino acid sequence MCHIFLIQSIIVGHLGWFQVFAIVNSATINICVHVSL
Secondary structure LEEEEHHHHHHHHHLLHHHEEEEELLLLEEEEEEEEL
PRMN LLLLLHHHHHHHHHHHHHHHHHHHHHHHHHLLLLLLL
PiMo oooooTTTTTTTTTTTTTTTTTTTTTTTTTiiiiiii