NONHSAT034313
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT034313 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(S) |
Length |
1440 nt |
Genomic location |
chr13-:74700603..74702042 |
Exon number |
1 |
Exons |
74700603..74702042 |
Genome context |
|
Sequence |
000001 CATTGAACTG CAAATCCCCA GTTAAATCAA GATTGTGTTG ATTAAGCTAT GTCTGATTTA TGGCTTAAAA GTCACTTGGT 000080
000081 TAGACTCAAA CATTGTTGCA ACATGCTATA TGTTATTCTT AACTAACATT ATACAAAATG CACAATAAAG GTAGATAATG 000160 000161 AGGATCTTAC ACGTTATTTG TACATTTATT GAATACCTAT TTATAATCAC GCATGATTTC TCCGCAACTG CATTTTCTCC 000240 000241 AGTTAAAAAA GAAACAAAAA CAATTTTTTT AAACCCTTGC AAGAGCAAAG AAACAAACTC AAACTAGCTC TTCAATATAA 000320 000321 CTGATTTAGA CTCTTTCCAT GTTACAGGTA TCTTGCCTGA CTCCAATTCA TGTTACAATT ATCACTGCAA ACATCAGCAT 000400 000401 CACTTTTTGT GGGACTCTCT TATTTATCAT CCCCTGCTTT AAGAATACAC TGTGTTCCGG TTGGTATTCT CGGGCCCCAC 000480 000481 AACTCATAGT ATTCCTTCTG GTGTTAATTG CTTGTTGATT TGCCTTGTTC TAAATGCCCC TATCATGGTC TTTTCCACCC 000560 000561 TAAGTAGCTA AATATATTCA ACGCTGTCAA CCATTCCTCG ATTCACTTTA TTTCCCTGAA AAAATTTTTT ATGTCTTCTT 000640 000641 GCAAAAAGAA ATCTTGTAGT ATAGTAGAAT TAAACCATGC TGCATTTATA AATATTTGCT CTAGTGTATT GATGGCTCTC 000720 000721 TTAAAAGCTG CCATTCAGGC CGGGTTTGGT GGCGTGTGCC TGTATTCCCA GTTACTTGGG AGGCTGAGGC AGGAGGATCC 000800 000801 CTTGATCCCA GAGTTCAGGG CTACAACGAG CTATGATCAA TTGAGCCAAT GCACTCCAGC CTTGAAAACC CTGTCTCTAA 000880 000881 AACAACAGTA ACAACAAACA GCCATTCAGA GTAAATAGTA GGTACAAAAT AAAATACTCC TTATTGTATA CCTAGTATAA 000960 000961 TACAGAAGTT AAGAACTTGG TTTTTCATAT GTTAGTGTGT TTAATATGTA CTCTTTAGTA AACAGGTACT GGTAGCCCTT 001040 001041 GGCTTTTATA TCATTGACTT TTCAAATAAC TGGCACATGG AATACTATAC GTGTCACCTC TGAAATGCCA TTTATATACT 001120 001121 GGATTTTGAC TTACGAACAT CATTTGATGA ATGCCTTTTT TGGTCTGTTT GTGTTGCTGT CTTGCCAAGT AACCCCCACC 001200 001201 TGCTACAGAA CTGTGACTTT GCCACTTTTG GCAAAAATTT CAAAAATTAT TTGGAAAATT TTATTGCTTT TTACCTTATT 001280 001281 TTAACAAAAC AAGTGGAAAA AGGGGAAATG AAAGCATCTA GTTATGAGAA AGTTTATTAT CTTGATATAA AATTGAGACA 001360 001361 ATAATCATTA GATGTGCTGA AAGTGATGAA TCTTTATTGG AAGTGCTGCA TGGAGTTAAG CTGATGAATT GTGAAAAAAA 001440 |
Predicted Small Protein
Name | NONHSAT034313_smProtein_338:517 |
Length | 60 |
Molecular weight | 6515.9403 |
Aromaticity | 0.101694915254 |
Instability index | 43.7610169492 |
Isoelectric point | 8.39459228516 |
Runs | 14 |
Runs residual | 0.0928315969523 |
Runs probability | 0.0263961440432 |
Amino acid sequence | MLQVSCLTPIHVTIITANISITFCGTLLFIIPCFKNTLCSGWYSRAPQLIVFLLVLIAC |
Secondary structure | LLEEEELLLLEEEEEELLEEEELLLEEEEEELLLLLLLLLLLLLLLHHHHHHHEELEEL |
PRMN | LLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHLLLLHHHHHHHHHHHHHHHHHHHHHL |
PiMo | oooooooooooooTTTTTTTTTTTTTTTTTTTTiiiiTTTTTTTTTTTTTTTTTTTTTo |