NONHSAT034615
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT034615 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
853 nt |
Genomic location |
chr13+:89193084..89197764 |
Exon number |
3 |
Exons |
89193084..89193698,89194157..89194227,89197598..89197764 |
Genome context |
|
Sequence |
000001 ttgccctgct gggttttgga cttgcttgga gctttttact cttattttga ttctctctcc cttttggaat gggaatgtct 000080
000081 gtcctatacc tgtaacacca ttttatcttg aaagtggata acttgcctca atttcggagg tttacaagta agactctgga 000160 000161 atttggactt ttgagctgat gctgatgctg aaatgagttt ttggggctat gaggatggaa aaaaacgtat atgtatttaa 000240 000241 agttgtgaga aagacataag ttttggagat ccaagggcag aaCActatga cgtgaaagtt tgttccctct gaaattcatg 000320 000321 ttgcatgaac tttgtcccca gtgtggcagt atcgagaggt aaggccttca agaggtaatt ggatcacggc cctcaggagg 000400 000401 gaatttatca attaatggat taatggatta atgaattgtc atgggagaga tattagtggt ttcaaaagca gagaaagaga 000480 000481 gacctgagct agcacactcc tccccttcac catgcgatgc ccttcactac cttgcgactc tacagcgagt caccaccagc 000560 000561 aatgagacgc tcatcagata tggatcctca accttgaaat gctcatctcc atactGCTTT GAAATAATCA TTAAAACTAT 000640 000641 ACATTTAACA AGATCGGAGT CATATGGTGC GCATCTGCCA GCACAGcaat aatacaagag gacatcacca agggaatgag 000720 000721 cctagaccaa gaaaggtact acaaactggg tctgaagcac tgtgaacagg gtggaagaag agcaaaacat aaaacctgtt 000800 000801 tcagagaatg agtgacaagt TTTGTTGGGT CAAATACAGC GACTGCTCAT GTA |
Predicted Small Protein
Name | NONHSAT034615_smProtein_440:691 |
Length | 84 |
Molecular weight | 9205.4033 |
Aromaticity | 0.0602409638554 |
Instability index | 65.4361445783 |
Isoelectric point | 6.88946533203 |
Runs | 12 |
Runs residual | 0.0045515394913 |
Runs probability | 0.0282929988812 |
Amino acid sequence | MGEILVVSKAEKERPELAHSSPSPCDALHYLATLQRVTTSNETLIRYGSSTLKCSSPYCF EIIIKTIHLTRSESYGAHLPAQQ |
Secondary structure | LLEEEEEELLLLLLLLLLLLLLLHHHHHHHHHHHHHHLLLLLLEEEELLLEEELLLLHHH EEEEEEEEEELLLLLLLLLLLLL |
PRMN | - |
PiMo | - |