NONHSAT034649
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT034649 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1024 nt |
Genomic location |
chr13+:91145542..91187596 |
Exon number |
6 |
Exons |
91145542..91145671,91150464..91150519,91165742..91165826,91179654..91179752,91185030..91185074,91187009..91187596 |
Genome context |
|
Sequence |
000001 ATACAATGGC TTCTGGTCAA TTCAGTCATA AGATGTATTC CTGGCTGGAA AATTCTGCTA TTTGGAATCT ACAGTTAGAC 000080
000081 AAGACTGCAT GTTAGACTCT GAAGTTAGGC AGGGTCACCA CCCTGGACAG GTATGGAATG TATTCGGTGT TGAGGAGTTT 000160 000161 GGACAGTACA GCAGCAGCTG CTCTAGAGCA TAAGCAGATG GTGAATGTTC AACTTGATTA CATTGACCAA ACGGAATTGG 000240 000241 ATAACAAACT CGAAATAGTT TGAGAAAAAA GCACACGTAT AATGCCTAGA GATGTAAAAG CCATTTTGCA AGAATGAGAA 000320 000321 TGAGTGCTAC ATGCTAAGGA AAGTGGAATG GAAAGTTAAG AACAGTTAAG AATGAGGTGA AGACTTGAAA AGGGAAAATT 000400 000401 GTCTTTGTTG AAGAGCGCTT GTCTCCTGAC AGTTACTCAG TGATGCAAAG CTAAAAAGAG CACTGTGCTC ATGGTGGAAA 000480 000481 ATAATTCCCA GGACTTGACA GGGAAGAATG TACTCATTCC ACGCCCCGGG CAGAAGTCTG CTGAGACAAA CAGAAGAAAG 000560 000561 ATAGTTAGTG AGCAAATTCA TCAAGACCAA TATCATGTAT TTCTCCCCCT GGCCTGATGG CTGATTTGCA CTCCTCCTGT 000640 000641 AAGCAACAAA ACTGCAAAAC CAGTGCTACA AAACAGAAGC ACCTGTAAGT CCGTGGGAGC ACATCTTTGC TCAACAAGAG 000720 000721 ATCCTGACAA CTAACAACTA ACAACCATCT GCCTGAGACA CAGTTCGAGT TTTTAAGATG CATCAGTTCC CCTTTCCAGC 000800 000801 CTGAAGCCTC ATCATCAAAC AATGCTTCCA ATGCTTGGCA TGTTTAATTA TAGAATTATA AACTATTAGA GCTTGCTTCC 000880 000881 TTGGCAATTA TGTGAGGCAA CCCTCAAACT TTCCAGAGGA TAATGAGCGT AGGCTAATTT GATGGTATTT CAAGGTCATG 000960 000961 CATCTATTTG AAAAAGAGAT CAGAATAAAA TCCAGATTTC AAAAAAAAAA AAAAAAAAAA AAAA |
Predicted Small Protein
Name | NONHSAT034649_smProtein_470:616 |
Length | 49 |
Molecular weight | 5501.155 |
Aromaticity | 0.0416666666667 |
Instability index | 41.00625 |
Isoelectric point | 8.23040771484 |
Runs | 9 |
Runs residual | 0.0219298245614 |
Runs probability | 0.0488429606077 |
Amino acid sequence | MVENNSQDLTGKNVLIPRPGQKSAETNRRKIVSEQIHQDQYHVFLPLA |
Secondary structure | LLLLLLLLLLLLEEEELLLLLLLHHHLLHHHHHHHHLLLEEEEELLLL |
PRMN | - |
PiMo | - |