NONHSAT034879

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT034879

Source

NONCODE4.0

Same with

,

Classification

sense

Length

3841 nt

Genomic location

chr13+:99083411..99087251

Exon number

1

Exons

99083411..99087251

Genome context

Sequence
000001 TGTTACCTAC CGCTCAACAC CTTCCTCCTG CGGCCACTGC ACCGGCTCAT GCACTACAAG CAGGTCCTGG AGCGGCTGTG 000080
000081 CAAACACCAC CCGCCGAGCC ACGCCGACTT CAGGGACTGC CGAGGTGAGT GCTGGGAGCC TGCGCCACCT GGTGCCCATG 000160
000161 CCACAGTTCA GGCCGGGTGC TCCCAGACTG AGCCCAGCCA GGGAGGGGCT CCCCGGGGAG AGAGGTCAGC TGATGCTGGG 000240
000241 TCCCAGGTTT TCATCAGGGT GGGCGCCGGT TTTTATTCCT GCTCTGGTGT TTGGTTACAT CTTGAttttt tttttttttt 000320
000321 tttgagactg agtctcactc tgtcgcccag gctggagtgc aatggtgcga tctcggctca ctgcaacctc cacctcccgg 000400
000401 gttcaagcga ttctcctgcc tcagcctctg gagcagctag gattacaggc gcccgccacc acgcccggct aatttttgta 000480
000481 tttttagtag agacggggtt tcaccgtgtt ggtcaggctg gtctcgaact cctgaccttg tgatccgccc gccttggcct 000560
000561 cccaaagtgc tgggattaca ggcgtgagcc acggtgcccg gccACATCTT GATCTTTCCG TAAAGAAGGT GCTGATGATC 000640
000641 GTCAGGACCC CTTTCTTCCT TTGCCTCTTG CATGCATTTT CTCCTTTGGT TCCTGGGTGG TTTTGTGCAA AGATCCCTAG 000720
000721 AGAAGCTCCG CTTACAGTTA GCCCCCACCC AGGAAGCTTG CTTCTACCCA CGTGACGGAA ACTCATCCCT CTACCATGGC 000800
000801 CACAGAACAT AGCTTGTAAG AAATCCTGTT GCTCATTGCT ACCGGTCATT TGTAATGTGC CCATCAGCAT AATGAGCATC 000880
000881 TCTCCTGTAT TAACTCTTCC CAAGCCTCAG GCACAGGTGA GTTcatctta catatgggga ctacggagac tagagaggtt 000960
000961 aaggaacctg cccagagtca cacagcttgg agggaaatga tttggaacct aaatctAGAA CCCATGGTCA CAACCGTCCT 001040
001041 GCCCTTCTAT CTCATGGACA GTCCTACCCG CTCGTACTTG CTCAGCCCCA GGCCAGGtgc tgtgtacctg atactgtacc 001120
001121 aacgttcaca ccattactcc tttaaggacc cctttagatc aattgcatta tcccatttta cagagcgtga cgctgagact 001200
001201 caggggaagg gacttgctgg gtcactcaga ggtcagagcc gcattccaga cctgcttttc ccacggggcc acgcgtgctc 001280
001281 ttCTGAACGG AAGTCGTTGT GTCTGGTGTC ACAGTTGGTC TGTGGGTGTC TGCCCTCCCT GGCCTAGCAT GCGGAGTTGG 001360
001361 CCCTGCGTAG GTGGCTCCCG CACAGGTGGC CCGAATCCAC ACACCCACTA GGAGGGCAAG GCCCTTATTC CTTGCCTGAA 001440
001441 ATGTCAGAAA CACCTCCCAA CTCTTTAGCC AAAACTGTCA TCTTTTTTAA AAATCCATCT TCTTACACCT TGGCTTAAAA 001520
001521 CCTGGGTGAC GGCTGACTGC CTCAGGCTAA AATCGGAAGT CTTCATGACC TGGCCTGGCC AGCTCTCACA CCCCAGCTGC 001600
001601 GCAGCGAGCA CCTGTACTGG GCGTGTGAGG GAGAAGGAAC AGTGCGGCCC CTGACCTCAC AGGACCCACT GGAGGGTCTG 001680
001681 CAGGCAGGTA CCTGGGTGCT GGAGGGTCTG CAGGCAGGTA CCTGGGCAGT GGCAACCCTG CACTAGGGCC GTGAGAGAGA 001760
001761 AGTGGACGGT GCAGTTGGAG CCGGGGCGTT AGGGGGTGTT GGGGGGATCT CGAAGGGAAA TGGTGTCTAA GTTCAGAACT 001840
001841 AACATGTAAA TAGGAGTTTT CCTGGGTGAA AGGAGGGTGT GGAGAATAGA GTTAGAAACA GCACAAGCTC AGGTTCAGAG 001920
001921 GGGACAGAGA CCGGAACATT GCCAAAAGCG TGCAGGGCAC AGGGAGAGCC ACAAAGTGAG GCTGCGACAG AAAGCAGCGG 002000
002001 CTACATCCCA CTGCGCCCCA TGGACCCCGC AAAGCCGTAA CCTAAGAGCA GAGGCCGAAC AGGAAGTGTT TTAAGGAGGG 002080
002081 AAACAGTGAT ACCAGGCTTG TTCTAGAAAA ACCGTTGtta atatctagaa tatatggcgg actcctacaa attagttgtt 002160
002161 aaaaaaaggc aacccaatag gtagaagact tggcaaagta attgagacag tgacagttca cagaagggga aCACAGGTGC 002240
002241 CTCCTGACAT GGTTTGTCAT TGACCATCTG TCTTTAAAAC AAACCATGCT ggccaggggt ggtggctcac acctgtaatc 002320
002321 ccagcacttt gggaggccaa gatgggagga tcactggagg ctgggagttc aagagcagcc tgggcaacac agtgagacct 002400
002401 tgtctctaca aaaaatttaa aaattacgag catgcaccta tagtgccggc tactcaggag gctgaggtgg gaggatcgca 002480
002481 tgagcccagg agttggaggc tgcagtgagc tatgattgca ccacagccca ggcgacagac ctagacccag tctctaaaaa 002560
002561 caaaaCCATG CTGCCtcttg cctccacacc ttggtgcatt ccgttccttc tgcttagagt cctggccacc acctccttgg 002640
002641 cctttcctgg ccagctctct ctcgtccttt aagcctcagc tTGTGCCTGG CACCTGATGT TGAGCTGACC TCCTGTCCGC 002720
002721 CTTGTCCTGT CACACTGGCA TTGCCTGTGT GTTGGCCGAG CCCGGAGGAA AGGACCCAGG GCCCCTCCTG GCTCTGAGGA 002800
002801 CTCCTCAGAT CTGTCGCCCA TGGGGGTGAG AGCGGTGTGT GGTTTTGAAG GCGCTGTTCT TGGCGGACTC ATCCAGTTCC 002880
002881 ACTCTGCTAT TTCTCTAAAC AGTACCCAAT GGAGATAGGC TATCCTTGAT GATTGAGGAA GAGAGTGCTA GCTAGCTTAA 002960
002961 AGCATGAAGT GGCAGCACTG TAGGAGCCTA GGTTTCCAGA GCTAGAGGGA CACTGAATGC CAAGGGCTGT TCCCAGCACG 003040
003041 CCCCTGCCCC TGAGCACCGG GGGCCGGGGT GCCATCATTC CATCATTTTC CTCTCAGAGC TCCCCACTAC CCCCCAGCCC 003120
003121 TGCCACTGAG CACTGGATGC CAAGTAAATG TTTATTGGAC CAAACTGGGT GGTCATGTCT GAAAATCGAG CAAGGCCTGG 003200
003201 GATTTGTCAC TATGGCTGAG ACCGCATTCT CTGATAAGCC TGGGAGAATT TAACTCGCAT CCTTGGGGGA AAAAACAAGA 003280
003281 AAACTAAATG CTTCCCTTCC AACACTGAAA TGCTGGGGGA AAGCAGTGAA AGAGGTATTT AGAGTTCTGA AGACTGAAGT 003360
003361 TCAGTCAACA AGTATTTCTT GCTTTTCTTG ACCAAACTAC CCAAGTGCTC AGCCGCTGGG GACTTGAGTG CCACCCAAAC 003440
003441 TTGTCAGCCA CTGGGGACTT GCGTGCCACC CAAGCTTGTA TTAATCAGGC ACTAGCTTCT TTTAAATATT GGATGCCCAC 003520
003521 CAGTATAGGG GAGCCGTGCC TCTATCGAAA AATAAAggcc tgatgtggtg gctcatgcct gtaatcccag cactttgggc 003600
003601 ggccaaggcg tgtggatcgc ctgaggtcag gagttcgaga ccagcctaac caacatggtg aaaccttgtc tctactgaaa 003680
003681 atacaaaatt agccgggcgt ggtggcacgc acctgtaatc ccagctactc gggaggctga ggcaggacaa tcacttgaac 003760
003761 ctgggggcag aggttgcagt gagctgagat tatgccattg tactccagcc tgggcaacaa gagcaaaact ctgtctcaaa 003840
003841 c
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Predicted Small Protein

Name NONHSAT034879_smProtein_671:811
Length 47
Molecular weight 5422.1672
Aromaticity 0.152173913043
Instability index 73.9784782609
Isoelectric point 9.18426513672
Runs 7
Runs residual 0.00918737060041
Runs probability 0.032566179625
Amino acid sequence MHFLLWFLGGFVQRSLEKLRLQLAPTQEACFYPRDGNSSLYHGHRT
Secondary structure LLHHHHHHLHHHHHHHHHHHHHLLLLLLEEEELLLLLLLLLLLLLL
PRMN -
PiMo -