NONHSAT034906
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT034906 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
610 nt |
Genomic location |
chr13+:99853146..99966474 |
Exon number |
6 |
Exons |
99853146..99853193,99883688..99883767,99890681..99890808,99896086..99896205,99896769..99896878,99966351..99966474 |
Genome context |
|
Sequence |
000001 CCGAGCCCGG CGGGACCATG TTCACCAGCA CCGGCTCCAG TGGGCTCTat ggagtttctc cctgtcgtcc aggctggagt 000080
000081 acaatggtgt gatctcggct cactgcagtc tctgtctcct gggttcaaAC AAGGCGCCTC TGTCGAAGAG CCTTCTGCTG 000160 000161 GTCCCCAGTG CCCTCTCCCT CCTGCTCGCC CTCCTCCTGC CTCACTGCCA GAAGCTCTTT GTGTATGACC TTCACGCAGT 000240 000241 CAAGAACGAC TTCCAGATTT GGAGGTTGAT ATGTGGAAGA ATAATTTGCC TTGATTTGAA AGATACTTTC TGCAGTAGTC 000320 000321 TGCTTATTTA TAATTTTAGG ATATTTGAAA GAAGATATGG AAGCAGAAAA TTTGCATCCT TTTTGCTGGG TTCCTGGGTT 000400 000401 TTGTCAGCCT TATTTGACTT TCTCCTCATT GAAGCTATGC AGTATTTCTT TGGCATCACT GCAGCTAGTA ATTTGCCTTC 000480 000481 TGGATTCCTG GCACCTGTGT TTGCTCTGTT TGTACCATTT TACTGCTCCA TACCAAGAGT CCAAGTGGCA CAAATTCTGG 000560 000561 GTCCGTTGTC CATCACAAAC AAGACATTGA TTTATATATT GGGACTGCAG |
Predicted Small Protein
Name | NONHSAT034906_smProtein_356:589 |
Length | 78 |
Molecular weight | 9103.6215 |
Aromaticity | 0.155844155844 |
Instability index | 60.0194805195 |
Isoelectric point | 7.62213134766 |
Runs | 7 |
Runs residual | 0.0451722190853 |
Runs probability | 0.0595427360133 |
Amino acid sequence | MEAENLHPFCWVPGFCQPYLTFSSLKLCSISLASLQLVICLLDSWHLCLLCLYHFTAPYQ ESKWHKFWVRCPSQTRH |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLHHHHHHHHHHHLLLLLL LLLLEEEEEELLLLLLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLL LLLLLLLLLLLLLLLLL |
PiMo | oooooooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTTTTiiiiiiiiii iiiiiiiiiiiiiiiii |