NONHSAT034952

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT034952

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

3067 nt

Genomic location

chr13+:100720931..100723997

Exon number

1

Exons

100720931..100723997

Genome context

Sequence
000001 cagaagtaca aaagcttgac aacatacgct gttggtaagc ctggggagaa acaggtattt ccacacattg ctgttgggat 000080
000081 tgcaaaatgg cacaactccc ctggaaggaa atctggcaat atttaacaaa attacatgtt catctactct ttgattcagt 000160
000161 gactcttcta gaaatctagc tgatacacct ccacaaatgc aaactatgat gtacagatat gatatgcaaa tgcaaaataa 000240
000241 gatatgctat acagatatgc tatttgcaat aggaatggct tgaaaaccag tacaactacc catgaatagg agactgattg 000320
000321 aataaactag ggcacatcta cacGCACACA CATATTTATG CATATGTATT TTTTCAAAGA AATAATAAAC AAGAAATTGT 000400
000401 TGAAAATGGA AATGGCTACT TCTGaacaat gggtgagatg ggaataggga acagggtgag agcaagaact cttggagtat 000480
000481 ctttctttat acagttttaa cttttcaatc atgtaaatta ctcatatatt caaaaaccaa aattaagtca aatgggaaaa 000560
000561 aatcaaatta aacacaaaca gaaacaattg aacacaaaca gaaacaaatg aacagacctg aatataaaac ctaatcacac 000640
000641 aggggaaatg attacttcaa ataactttag aacatagAAC ACTGGCAGTA ACATTTTCCA GACACACATT GTAAGGACAA 000720
000721 ATAAAACTAT GTTTTCTGAT TTCCATTGTG TGCATGTTCC TGTAGACTGA TTTCAAGTCA CCAGTGgttt cacaactatc 000800
000801 tggcaagatt cctgacaatt tagcaattga ttctcataag ccggttctat ctggctctaa gaaatcattg CTTATAGGTA 000880
000881 CTCTAGTCAA GGTAACAAGC TGTCTGTCAA CAAAGCAAAG CATAAATCAa aaaagatgaa agaaaatatc tagaaaaatt 000960
000961 atgaaaagcc tccatgcaga ttgaagtgtg acaaacacat agctccagct ccttatcttc catggtcctc aggtcttggg 001040
001041 ctgtcttcat gcagtcgtta gcttgttcct atggtcttca gtggaagttg tccccttcct gcagttttct gcttctggat 001120
001121 gattcctcag tattctccat ttgaggtctc tgatagcaat gtcctcctga ttcaagaatg gctaatttct ccttggtcaa 001200
001201 gaaacaggga tatagctggg cacagtggct catgactgta atctcagcac tttgggatgc tgacgtggga ggatatcttg 001280
001281 agggattgag ggcaggtgtt tgagaccagc ctgggcaaca tggcaagacc ccatctctta aaaaaaaaaa aaattagctg 001360
001361 ggtgtggtgg cgcatgcctg tagtcccagc tacttggagg ctgaggtggg tcatttgaac tggggcgttt gagtttacag 001440
001441 tgagctatga ttgcatcgct gcactccaac ctgggtgaca aagaccctgt cttaaaaaaa ggaagaaaga aagaaggatg 001520
001521 caaggatcaa taccctagag ttcaattgct gtgttatttg ttagttagtg cctacaaggt cctttccact gaggtaaagg 001600
001601 gcagtctttt tctgatgtgt ccttcagcag atgaagcctc tacattttaa attgtcaatg gtttttgttt ttgttttttt 001680
001681 agatgcagtt ttgctatgtt gcccaggctg gagtgcagag tgcagtagta ggatcatagc actctagcaa gatccagtag 001760
001761 caggatcata gcacacaaac ttccagcctc aagcgatcct cccatctcag cctccccagt tgctgggact acaggtgggt 001840
001841 gccaccattc cctactaatt ttttgttttt taaaaattgt ttgtacacac catgtcttgc tatgttgccc aggttggtct 001920
001921 caaacttctg gcctcaagtg gttctcctgc ttcagtcttc caaagtgtgg ggattatagg tgtgagctac tgttcctggc 002000
002001 ctgggattgt tttgagggat atttttgaaa aggtattcat atttcttgat aaAACAAATA GTTGTTGATA TGAGtgtatc 002080
002081 aattccactt atgtgaagta cctagagtag ccaaattcat agtgagagaa agtagatggt ggttgcaaga ggctgggaga 002160
002161 aggaggaaaa tgaggggtta gtgtttaatg gatagagttt cagttttgca agatgaaaaa agtttgggat ggatagtggt 002240
002241 gataggggca caacagcgtg aatgtactta atgccactgg accatacact gaaagatggt taaaatgcta aattttgtta 002320
002321 tgcctatttt acctcagttT TTACAAAACC AAGCGTATCA CCCCAGTCAT AGGCAATATT GGCTATATCA GCTCGTAATA 002400
002401 AGACAGTCTA TAATGGGAGC AACATTCCCA GGCAGATAAG ATGACTAAGT ATCAGTTAAT AGGTTGAGAA TCAATGGGCT 002480
002481 Aggccaggca ctgtggctca cgcttgtaat cccaatgctt tggaaggcca agagagggag atcacttgag gccaggattt 002560
002561 tgagaGTTAA TGGGCTACCT ATGGAGTTGA CTTCACTGTC ATTAAGAGAA AAGGCAATAG TTTGGGTCAA GGAAGTTCAA 002640
002641 GCGTTTCTGA AAGTTTAACT GGAGTTTGAG AATTCTATTT GTCCTTTCTA TATTACTTGA GATTTGGGAA ATTCTGAATA 002720
002721 ATACAAAGAA TGATTGCAAC TCATTGAGCA AATAAAAAGC TGAGGCCACA GTGGGgtgtg tgtgtgtgtg tgtgcgcatg 002800
002801 tgtgtgtgtg tgtgCGACAG AGAGAGACAG ATGGGAGAGT AAAAAAGAAA ATGTCTTCTT TACAGGATGT TAGCTAACGA 002880
002881 ATATAGAAGA AATGACAGAA TTAGggccag gtgcggtggc tcatgcctgt aatcccagca ctttgggagg ccgaggcgga 002960
002961 tggatctcct gaggtcagga gttcaagact agcctggcca aaatggcgaa accccgtctc gactaaaaat acaaaaatta 003040
003041 gccaggcatg gtggcatgca ttgtaat
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Predicted Small Protein

Name NONHSAT034952_smProtein_1070:1234
Length 55
Molecular weight 6103.9345
Aromaticity 0.148148148148
Instability index 64.3685185185
Isoelectric point 4.74920654297
Runs 9
Runs residual 0.00397470641373
Runs probability 0.0412961981589
Amino acid sequence MVFSGSCPLPAVFCFWMIPQYSPFEVSDSNVLLIQEWLISPWSRNRDIAGHSGS
Secondary structure LEELLLLLLLLEEEEEELLLLLLLEEELLLHHHHHHHHLLLLLLLLLLLLLLLL
PRMN -
PiMo -