NONHSAT035019

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT035019

Source

NONCODE4.0

Same with

,

Classification

sense

Length

1855 nt

Genomic location

chr13+:103472737..103492513

Exon number

7

Exons

103472737..103473482,103474093..103474197,103474415..103474509,103483915..103484047,103486816..103486902,103490993..103491089,103491922..103492513

Genome context

Sequence
000001 CGTATTTCTT CTTAAAACAG AATAAATAAA TAGTCTGTCT CTTTCTCCTT CTGTTCACAT TTGCCCCAGT TTCTTCTCTT 000080
000081 GAATCATGAC AGTTTGGAAA ATTGTCTGGA TTGCTTAGTG CCACTGAATC ATGCCATGGA AGGATTTTGT ATTTCACTTT 000160
000161 TAAACTTCTC TGTGACAGGA GAAGCACTGC TTCATGGCTT CTTGCCCAAG GATTTTAGAT GGACACAGTG GGTAATAAAT 000240
000241 GGATGAATTT TTGTTTGGGT TGAAGAATCT CTCTGAGAAG TTGACACGTG GGGGCAATGG TTTGTTTCTC TTGTATTTCT 000320
000321 GAAGTTGCAA ATAATCATGT AAGCAGTTCA ACCAGGAGTT TACACCAAAC TTTTAATAGG CGATATATCA TTATTTTTTT 000400
000401 TCCCATTGGT TTGGATAACA TCCACTTTAA CTGGCAGTTA GTCATACTTA GCTATTTTTG TTAAAGCAGG TGATTTATTG 000480
000481 TTATTTTATA TTTATGACAT GATTAATAAG TGAATATGGA AGATTTTACA TTGACTTAGG GGATCAAAGT TTTCATTATA 000560
000561 TTAACACCTT TAATTGCCAT GAGTTTTCTA TTTCTAGCAT GCATATTTTG TGTTCATTCA AGTGAAGAAA ACAGTCTTTT 000640
000641 GTGTTCTCAG GTACTGCATA AGCCGACCAC AGTATAAGAC TTCTTGTGGC ATCTCTTCAT TAATTTCTTG TTGGAATTTC 000720
000721 TTATACAGCA CAATGGGAGC TGGAAACCTT CCACCTATTA CCCAAGAAGA AGCTTTACAT ATTCTGGGCT TTCAACCTCC 000800
000801 ATTTGAAGAT ATTAGGTTTG GTCCTTTCAC GGGGAATACA ACACTTATGA GGTGGTTTAG ACAAATTAAT GACCACTTCC 000880
000881 ATGTAAAAGG ATGCTCTTAT GTTCTATATA AGCCTCATGG GAAGAATAAA ACAGCAGGAG AAACTGCTTC AGGGGCCCTG 000960
000961 TCAAAGTTAA CCCGTGGATT GAAAGATGAA TCGCTGGCTT ATATCTATCA TTGCCAAAAT CATTATTTTT GTCCAATTGG 001040
001041 CTTCGAAGCA ACCCCTGTTA AAGCTAATAA AGCATTCAGC AGGGGACCTC TCTCACCACA GGAAGTTGAA TATTGGATCT 001120
001121 TAATTGGAGA ATCAAGTAGA AAACATCCTG CCATTCACTG TAAAAAATGG GCAGATATTG TTACTGATCT AAACACTCAA 001200
001201 AATCCAGAAT ACCTGGATAT CCGGCACTTA GAGAGGGGAC TGCAGTATAG AAAAACAAAG AAGGTTGGGG GAAATTTGCA 001280
001281 TTGCATCATA GCATTCCAGA GACTTAACTG GCAAAGATTT GGCCTTTGGA ACTTTCCATT TGGAACCATT AGACAAGAAT 001360
001361 CACAACCTCC AACACATGCC CAGGGAATTG CCAAATCTGA GAGTGAAGAC AATATTTCCA AGAAGCAGCA TGGGCGTCTG 001440
001441 GGCCGGTCTT TCAGTGCTAG TTTCCATCAG GACTCGGCAT GGAAAAAGAT GTCTAGTATC CATGAGAGAA GGAACAGTGG 001520
001521 TTACCAGGGT TACAGTGATT ACGATGGGAA TGATTGACTA TGCTTGCTAC TGAACAGCTG GCATTATATA TGAAACTGCT 001600
001601 ATATACAGGA CTGTATAAAG ACAGTAGAAG ATTTTAGTAA GCCTACATTA AATAGGAGCA GATCTTGTGG TATAAAAAAT 001680
001681 AACCTTGTAG TTCTCCAGAT ACTAAGCTTG TATATGATTA TGGTGGGTGA TTTCAGATAT ATAAGCAGAT AAGCACAGAT 001760
001761 TATTGTCCTT TCAAGTTAAG AGTATATAAT CTGGACAGAA AATTTCACAA AATTCAATAA AATTACAACT GTTGTCTAAA 001840
001841 TAAGTGAAAC ACAAA
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Predicted Small Protein

Name NONHSAT035019_smProtein_296:463
Length 56
Molecular weight 6483.4378
Aromaticity 0.163636363636
Instability index 58.9927272727
Isoelectric point 7.78912353516
Runs 10
Runs residual 0.030303030303
Runs probability 0.0590001766472
Amino acid sequence MVCFSCISEVANNHVSSSTRSLHQTFNRRYIIIFFPIGLDNIHFNWQLVILSYFC
Secondary structure LEEEEHHHHHHLLLLLLLHHHHHHHHLLLEEEEEEELLLLLLEEEEEEEEEEEEL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHLLL
PiMo iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTTTooo