NONHSAT035060
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT035060 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1022 nt |
Genomic location |
chr13+:107028911..107030943 |
Exon number |
3 |
Exons |
107028911..107029013,107029215..107029432,107030256..107030943 |
Genome context |
|
Sequence |
000001 ACTTCCTGCA GAAATCCTCC AGCCCTGTTA GAAATGCCTC AGCCAGGGGG ACTCATCTCC TCAAACCTGG GGGACCGAGA 000080
000081 CCTATGAGAG GTCACAGCAT GAGCCAGGAC ATCGGAGGTA CCAAGACATT GTTATGAAAC TCCGCATGTG CCCCTGGTGG 000160 000161 ACGCTGCTGG ACCCAGCATG CACACTTCTC GGCTAATAGT CACCCTGGAT GAACCACCAT TGCCAGCGGG GAGCATGTTG 000240 000241 CAGCTTTCCC ACGCAGTGGA TGAGAACGAA GGTTACGACC ATTGTGTGGG AGGCGTCTGT GTAGCAATTG CTGGAATCAC 000320 000321 TAATGCAGAG GATAAAGCAA GCAAACAAAA AAACTTCCAG AAGAATCACA GAGTTTTAGA CCTAGAAAAA AACTGAAAAA 000400 000401 TCATCCATTC CACTCTCCTC ATTTTACAGA TGAGGGCATC GAGCCTCAGA GAAATGAAAC TTGCCCAAGA CCACACAGCA 000480 000481 AGTGAGTGGG GGACTCATGA CCCAAGACAC TTTTTCCAGG CTTCCTTCTA CCACATCATG CTGCAGAAAA CACAGCAGAT 000560 000561 GGGAAGAGAC GAGGCATGTG GTTGCCATTT CTGTATTACA TCCAATTCAT ATTTCATTTA GAAAATGTAT TTCTAGAACT 000640 000641 TGTTAAAAAA CCTGAATGAT TTTGATTGAA GTTTTTCAAA ACTAGGATTA CTATGCTTCT AATGGAGATC AAGTTCAAAT 000720 000721 TTTTAACATA TTTTGCCTTA TTTTGCCACT CCCCTCAAAA TATCCATAGT ATTGAATGCC CAGGTTTCAT GTTTGGAAAA 000800 000801 GCCCGAGGAT CTGTGCACAC TCTGGGCTAC TCTTGCCCAG CTCCTGACTG AGGCACTGGA CCTGGCCCGA TGCTGCTCTC 000880 000881 TGCTGCTGCC CAGCTCTTCT GCTCCACCGG CAACACTGTA CCCAGTTAAT CATTAGGGCC CTTGTCTCTG TACAATTGCT 000960 000961 CTGTACAACT CGATAAAATA ATCCATGCTA ACAAAAGTCT AGAATGGAAA AAAAAAAAAA AA |
Predicted Small Protein
Name | NONHSAT035060_smProtein_692:850 |
Length | 53 |
Molecular weight | 5882.8974 |
Aromaticity | 0.153846153846 |
Instability index | 68.4211538462 |
Isoelectric point | 7.76837158203 |
Runs | 9 |
Runs residual | 0.0227075184702 |
Runs probability | 0.043043043043 |
Amino acid sequence | MLLMEIKFKFLTYFALFCHSPQNIHSIECPGFMFGKARGSVHTLGYSCPAPD |
Secondary structure | LLHHHHHHHHHHHHHHHHLLLLLLEEELLLLLEEELLLLEEEELLLLLLLLL |
PRMN | - |
PiMo | - |