NONHSAT035515
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT035515 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1400 nt |
Genomic location |
chr14-:19911916..19913315 |
Exon number |
1 |
Exons |
19911916..19913315 |
Genome context |
|
Sequence |
000001 AGCTACAATG TTTTGTCATT ATTCACTCTG ATGTGAAAAA GGCAGTGAAT TTAATAGAAA ATAACTTCGT AGAGCAAAAT 000080
000081 CTCAGGTGTG TTTTTTTAGT GCCGCAGTCT TGGATGATGG GTTCCTAGAA GCTCTCAACA TCTCTTCTTA ATTGGAGAAA 000160 000161 GTGTTAAGCC CCAAAGTAGC TGGAGCAGTA CATCTTCAAT TTTTGACAAG AAAGCAGGAA CTTGATTACT TTGAGTGCTA 000240 000241 TTCATTAGTT TCTGCTTTCA TTGAGAATGC AACAAAAGCC AACTAGGCTG CTGCTAACTC CTTGCTGGAC TTCTTCTGCC 000320 000321 ACTGTCACAG GAACTGTAAT CTCACTGGAC AATTAACTAG GGAGTCTTTC ATCTTGAGTG ACTGCTGCAC AAATGATCTT 000400 000401 CAAAGCATTT TAGCCACCAG AGGAATTCTC TTGAAATACC CAAAATCCAT CAGTATCTTG AATCATGCTG GATTTTGAAG 000480 000481 AATTCTTAAC AAGCCATGTA AAGGGGGCTC TCTGGCCTTG AAATAGTGAT GTTTTTTATA CAGAAAGGAG AATGCAGAAT 000560 000561 GGTCAGACTA CCATGCACTG TTAAATTTGA TTTCAAGAAA TTACAGGAAA ACTTTCCAAA GTTCCATCTC ACAGAAATTA 000640 000641 TTTTTACAAA GAATTCCAAG ATAAGTTTAG TTTTATGGAA GACTTTTATG TGGTTTTTAC TCACTCTTCA TCTCAGACAT 000720 000721 CAACAGATGA TTACATCACT TATTTAGCTA GTAAATTTAT TAATATAAAA ACTCAGAGAC ATTCCAATAT CCACATTGCT 000800 000801 TACACCATTA GGCATAGATT CAGTGTCAGC TATGACAATT GAAAATAAGC TGTTTTGTGA TTTAAAGGTT TAAATTTCTC 000880 000881 TAACCAAACT GCTTGATCCA GATGCAGGAC TGCAAATGTT AATATTTGTT CTGGAAGAAC AATCAAATAA GACTTAAGAG 000960 000961 GAAAAGGAAT GGCCACAATC CACCTGAAAT TTTTTTTTTA AAAAGTGTGC AGCCTACTAA ATCAGAATGA AAATAGAAGT 001040 001041 ACAAGATTAT AAACAAAATG CAATCAAACT TTTCTTAAGC TTACCTAAAG TTATTTCATC TGAAAATTTC AAGCAACTTT 001120 001121 GTTCAACATT AAATTGACAA TCTAAACTAA CAAGTCTTTT GAATTTATGC ATGGTAGTAA ACATTCTCTC TATTAACTTT 001200 001201 ATTACCTAAG GCTAAACCTA AAATTTTTAA GCAAAATTAG AAAAATAGTC TTCACTCATC AAAAAATAAA GTTTGTTACA 001280 001281 TTTAGTATTT TCCCAATAAA ATTGGTCGTT CTTGGTTTTT TATTTGGAGA GTCTGTGCAA AATGTCACTA AAAATAAATT 001360 001361 AGCACTAGAA ATTATTTCTA AATACCAAAA AAAAAAAAAA |
Predicted Small Protein
Name | NONHSAT035515_smProtein_674:841 |
Length | 56 |
Molecular weight | 6550.155 |
Aromaticity | 0.163636363636 |
Instability index | 61.4438181818 |
Isoelectric point | 6.89373779297 |
Runs | 8 |
Runs residual | 0.00606060606061 |
Runs probability | 0.0435545839958 |
Amino acid sequence | MEDFYVVFTHSSSQTSTDDYITYLASKFINIKTQRHSNIHIAYTIRHRFSVSYDN |
Secondary structure | LLLEEEEEELLLLLLLLHHHHHHHHHHHEEEEEELLLLEEEEEEEEEEEEEEELL |
PRMN | - |
PiMo | - |