NONHSAT035526
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT035526 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1646 nt |
Genomic location |
chr14+:19959517..19961162 |
Exon number |
1 |
Exons |
19959517..19961162 |
Genome context |
|
Sequence |
000001 CTGTCCGCCT GCCTGCAGAA GTGGCTCTGA GAGCTGTTTG AGGAGAAAAT GGGGGACTTT GGGCTTCAGC CCGAGGAGAA 000080
000081 CACGGTGGAG ATGGAGGAGC CCCTGGGGGT CCGCAGGTTA ACTGAAAACA TGGGAGGACA CAAGCGCGGG ACCAAGTCTG 000160 000161 TCACTAACCT GTAAAGAACT CTGACCAAGC TGACTGGGCA CTCTGTCTGC GCGCCTTTCT TTGCCACCAC GTGTGCGGGA 000240 000241 ATGCCTGGGG CACGACTGGG CCATCTCAGT GTTCTTGTTT CTAGCCATTC CGAGGTTACC CCTCAGCAAA ACGCCAGAGG 000320 000321 CCGGCAGACA CAGTGGAGCA TCCTGCAGTA GGGATCCGAA GCCGTGGAAT CTCCAAAGGG CCACGACTGC TTCCCAGAAG 000400 000401 CTCTAGCACG TTGCCCGGAA AGCCCAGGTG GTCTTTGGCA AGACCTCCCG Gattgtggtt ttgatttgca tttctctgat 000480 000481 gaccagtgat gatgaacatt ttttcatgtg tctgttggct gcataaatgt cttcttttga taagtgtctg ttcatatcct 000560 000561 tcgcccactt tttgatgtga ttgtttgatt ttgtcttgta catttgttta agttctttgt agattctgga tattagccct 000640 000641 ttgtcagatg ggtagattgc aaaaattttc tcccattctg taagttgcca gttcactcta atggaagttt tttttttttt 000720 000721 gctgtgcaga agctctttag tttaattaga tcccatttgt caattttggc ttttgttgcc attgcttttg gtgttttaga 000800 000801 catgaagtcc ttgcccatgc ctatgtcctg agtggtattg cctaggtttt cttctagggt ttttatggtt ttaggtctaa 000880 000881 catttaagtc ttcaatccat ctggaaAAGt taataataat aataataatg aaatatggaa aaaataaaaa aaaaaaaGAC 000960 000961 CTCCCGGAGA CCAGGAACTT GGTCGGTGCT TGCGGCCTGA GATCGAGCTC TGGGGCACCT TCCTGTCCTT CTGCTTTTTC 001040 001041 CTTGGCCGCC TTAGGGGGCG CGCCTCGCCA TGGGTCTCCC TGCGGGCGGC GCGGTGGTGC TCCTGGATGT CACCTCCAGG 001120 001121 CGCTTTTGAG ACTGCGACCG GCATCGGGCG CCCAGCACCT GCGGATTGGC CTCCCCATGC CTGGCTCAAG GACCTCCAGC 001200 001201 ACTCCGCAGT GCGGGCTGCA GGCGACCTCA ACGTGGAGCT GCTGCCAGCG CCACAGGCCC CAGGGAAGCC CAGGATCTGC 001280 001281 TTCCCAGGCC CAAGAAGGGC AGTTTCGGAA AGTCTTTGGC GTGATGGAAG GCAGCGCCCA TCTGGGGCGG GGCTGAGAAC 001360 001361 TAGGCTGGCG CCGCTGCCTG GTAAGCGGGT ACCAAGAGGC CCACGGCCTC CATCAGGAAC CAGGTGCTTC TCCAAATCCC 001440 001441 GGACTTCAAG GAGCAGCAAC GGCGTCAAGC TGGCTGACAC CAGGAACACC CAGAAGTCCC CACTCCTGTC CTTCCGCACT 001520 001521 CAGGAGTGGG GATGGCCACA GGGACACCAT CCGCCCACAA ACCACTGGCC TTTGCTGCCA TGGTGCGCGG AGATGCGGTC 001600 001601 CCCGAGGCCA CTTTCGGCCA GGACGCCGGG ATCTTATCAG CGGCAG |
Predicted Small Protein
Name | NONHSAT035526_smProtein_488:574 |
Length | 29 |
Molecular weight | 3236.9749 |
Aromaticity | 0.142857142857 |
Instability index | 92.8428571429 |
Isoelectric point | 7.68023681641 |
Runs | 4 |
Runs residual | 0.0603621730382 |
Runs probability | 0.0390611199435 |
Amino acid sequence | MMNIFSCVCWLHKCLLLISVCSYPSPTF |
Secondary structure | LLLHHHHHHHHHHHHHEEEELLLLLLLL |
PRMN | LLLHHHHHHHHHHHHHHHHHHLLLLLLL |
PiMo | i??????????????????????????? |