NONHSAT035526

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT035526

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1646 nt

Genomic location

chr14+:19959517..19961162

Exon number

1

Exons

19959517..19961162

Genome context

Sequence
000001 CTGTCCGCCT GCCTGCAGAA GTGGCTCTGA GAGCTGTTTG AGGAGAAAAT GGGGGACTTT GGGCTTCAGC CCGAGGAGAA 000080
000081 CACGGTGGAG ATGGAGGAGC CCCTGGGGGT CCGCAGGTTA ACTGAAAACA TGGGAGGACA CAAGCGCGGG ACCAAGTCTG 000160
000161 TCACTAACCT GTAAAGAACT CTGACCAAGC TGACTGGGCA CTCTGTCTGC GCGCCTTTCT TTGCCACCAC GTGTGCGGGA 000240
000241 ATGCCTGGGG CACGACTGGG CCATCTCAGT GTTCTTGTTT CTAGCCATTC CGAGGTTACC CCTCAGCAAA ACGCCAGAGG 000320
000321 CCGGCAGACA CAGTGGAGCA TCCTGCAGTA GGGATCCGAA GCCGTGGAAT CTCCAAAGGG CCACGACTGC TTCCCAGAAG 000400
000401 CTCTAGCACG TTGCCCGGAA AGCCCAGGTG GTCTTTGGCA AGACCTCCCG Gattgtggtt ttgatttgca tttctctgat 000480
000481 gaccagtgat gatgaacatt ttttcatgtg tctgttggct gcataaatgt cttcttttga taagtgtctg ttcatatcct 000560
000561 tcgcccactt tttgatgtga ttgtttgatt ttgtcttgta catttgttta agttctttgt agattctgga tattagccct 000640
000641 ttgtcagatg ggtagattgc aaaaattttc tcccattctg taagttgcca gttcactcta atggaagttt tttttttttt 000720
000721 gctgtgcaga agctctttag tttaattaga tcccatttgt caattttggc ttttgttgcc attgcttttg gtgttttaga 000800
000801 catgaagtcc ttgcccatgc ctatgtcctg agtggtattg cctaggtttt cttctagggt ttttatggtt ttaggtctaa 000880
000881 catttaagtc ttcaatccat ctggaaAAGt taataataat aataataatg aaatatggaa aaaataaaaa aaaaaaaGAC 000960
000961 CTCCCGGAGA CCAGGAACTT GGTCGGTGCT TGCGGCCTGA GATCGAGCTC TGGGGCACCT TCCTGTCCTT CTGCTTTTTC 001040
001041 CTTGGCCGCC TTAGGGGGCG CGCCTCGCCA TGGGTCTCCC TGCGGGCGGC GCGGTGGTGC TCCTGGATGT CACCTCCAGG 001120
001121 CGCTTTTGAG ACTGCGACCG GCATCGGGCG CCCAGCACCT GCGGATTGGC CTCCCCATGC CTGGCTCAAG GACCTCCAGC 001200
001201 ACTCCGCAGT GCGGGCTGCA GGCGACCTCA ACGTGGAGCT GCTGCCAGCG CCACAGGCCC CAGGGAAGCC CAGGATCTGC 001280
001281 TTCCCAGGCC CAAGAAGGGC AGTTTCGGAA AGTCTTTGGC GTGATGGAAG GCAGCGCCCA TCTGGGGCGG GGCTGAGAAC 001360
001361 TAGGCTGGCG CCGCTGCCTG GTAAGCGGGT ACCAAGAGGC CCACGGCCTC CATCAGGAAC CAGGTGCTTC TCCAAATCCC 001440
001441 GGACTTCAAG GAGCAGCAAC GGCGTCAAGC TGGCTGACAC CAGGAACACC CAGAAGTCCC CACTCCTGTC CTTCCGCACT 001520
001521 CAGGAGTGGG GATGGCCACA GGGACACCAT CCGCCCACAA ACCACTGGCC TTTGCTGCCA TGGTGCGCGG AGATGCGGTC 001600
001601 CCCGAGGCCA CTTTCGGCCA GGACGCCGGG ATCTTATCAG CGGCAG
[back to top]

Predicted Small Protein

Name NONHSAT035526_smProtein_488:574
Length 29
Molecular weight 3236.9749
Aromaticity 0.142857142857
Instability index 92.8428571429
Isoelectric point 7.68023681641
Runs 4
Runs residual 0.0603621730382
Runs probability 0.0390611199435
Amino acid sequence MMNIFSCVCWLHKCLLLISVCSYPSPTF
Secondary structure LLLHHHHHHHHHHHHHEEEELLLLLLLL
PRMN LLLHHHHHHHHHHHHHHHHHHLLLLLLL
PiMo i???????????????????????????