NONHSAT035621
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT035621 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
2061 nt |
Genomic location |
chr14+:21453058..21455430 |
Exon number |
2 |
Exons |
21453058..21453674,21453987..21455430 |
Genome context |
|
Sequence |
000001 CCCCCAGCCA TCTCTGCATC TGCAACACTT ATACAACACA AAAGCCACAA TGGCTGAAGT GTACAGCATT CCCAAAAGCA 000080
000081 GCACCCTGGC CCTGGCCCCC TCATGCTGGT CCTTGAACAG CAGTTGCCCG CATTCTGTGG CCCCAGGGCC TACATGGGCC 000160 000161 GGGTTCCCTG TGGAAGGAGG GCAAAGTAGA TATTCATTCT TTTACAGATT TTACATAAAG ATCTGTGTTT TTTTTTTTTT 000240 000241 AGGTTTATGT TAGTTGACAT GGAATGGAGG CATTAATCAG GTCAAGACTA AAATCTAGAG AAGATAAATC CAATGCATAT 000320 000321 GGAGCAGTGG AATCACTTCA GGAGGAACTG AACAGACTGC TTTAATTCAC TGCAGAATTT TGAACAGCAA GAAATCCAAA 000400 000401 GACTCAAGTT TCCAGCATAG AGGTGTGATG AGATGGAGAA TGTTTGTATG AAGAGAGAAA CAGGGGTGTT GCTAAAAACA 000480 000481 AAAAAGAAGC TGGGTTCCTC CTTGGAATGG CCCTCCCTTG CTCTACTTGT TTTGGGTTTT AGGCTCCCCT TTATACAACA 000560 000561 TGGCTCTTTG GAGTGCTGGA GTAGGATTAA AAAGAAGAAA GAggccaggc atggtggagg aggaggagga ggagggagag 000640 000641 gaAGCTGAAC TGGCTTGTAG AAGATTTCAT AGATGTCTGA TGCCCACAGT ACTATCAGAG CTTGAACAAA AACAGCTCCA 000720 000721 CCAAATTCAA AGTAGAAATT TGGAACAAGA TTTGAACAAG AAAAAAAATA CCACTTCCCA TAACACAGTC TCCTCCTCTC 000800 000801 CTAGCTTTAG CCCTTAACAC AGAGTGTGGC ACATCTAACA TGGTCAGTAA AGAATTCCAC CAACTCAAGA ACGAAAAATA 000880 000881 AACTCCCTAT CATGGATAAA TGTCTTTCCC CATTATATAT Ctttctttcc tctttatctt ctctttcttc atccctttct 000960 000961 tctcacattt tttcttcatt ttctGTATAA TAGCAAGTCT CCTAGGCCAG GTGGCTGTGC TGGCCATTCC CAGTAGTTCT 001040 001041 CAAAAACACA AACAGATCCT TCTGGAAAGT TCTGTCTTGA ATTGGTCCCT GTTGCAGGAC AGTACATTAG AAATGGTATT 001120 001121 TCTAGAAGGC TTGGAGAAGT AGATGATAAG CCAGAGTTTC CTTCTTGGGA TTCCTCTCCC GAGTCTGAAC TGGAAACCAT 001200 001201 TGACCTAGTT GTTAAACAAT GGAGGCCCCC AACCCAGAAC ATTTTAATGG GATAACTTTT AGATTTTCTT GAGAAACATG 001280 001281 AACTGAGAAT AGAAAGACTT CTACATTCTC TCACTGCCCT GGCCATTCCG GTCCCTATTT CAGGGTCTCA GTCCCTCAGG 001360 001361 AGAGATATAC GAGACCCCCA ATGGGTGTCC AATCCTTGGA TTTTCCTCTA AGACTTTATC CATGTGTTAA GAGTCCACAA 001440 001441 TGCACCTCCA AAGAAGCTCC TGTGTGACCA CCATTCATCT TCTGAGGATA TCAGCGATCC TTTCATGCCA TCCCATGCCA 001520 001521 AGACTAACAC TGCTCTGTGG TGATCCCCCA TCCTATATCT GTAGGAAGCC ATGCTGGGTC TGCCCGAGCC AGAGTTTTCA 001600 001601 AAATCTATAA TCCCTCCAGA ACCTCCTTGC TTTCCTCAAC ATAGATTTTT GCCAAAGGAG ATCAGATCCA ATTGGAAGAT 001680 001681 CCCTCCCCCG CAGCAGAATA CTTTGTAATT GGATTAGTCT CAACAGCAAC AGTAGTTCTG GCCTTGAATA TGAGTTAATC 001760 001761 AGCCAAGTCA CAACACAAGA AAGCTGACTG CACCAGAAAA CCCTGTACAA TCCGTGAATT TCTTCATGGT TGAGACTCAG 001840 001841 ATGAATCATC ATGTTGATCT GACTCATGCT TCTCCCTGCC TTAGGCCAAG AGACTGAGGC TTCACCTGGG ATCTGCCTCT 001920 001921 TTCCCACTCA AGAGTCAAAT GAGCCCCCAA GGAGTAAGAA AAAAATGTGA TTGATTCTGA TTTGCACCCC AGTCTTTTTT 002000 002001 TAATTTATCA TAAAGAATCA AATATTTACA TTAGAAGATA TCTTGTGCTG TGAAaaaaaa g |
Predicted Small Protein
Name | NONHSAT035621_smProtein_899:1141 |
Length | 81 |
Molecular weight | 9213.8556 |
Aromaticity | 0.1875 |
Instability index | 47.585 |
Isoelectric point | 5.41058349609 |
Runs | 15 |
Runs residual | 0.0486842105263 |
Runs probability | 0.0465465465466 |
Amino acid sequence | MSFPIIYLSFLFIFSFFIPFFSHFFFIFCIIASLLGQVAVLAIPSSSQKHKQILLESSVL NWSLLQDSTLEMVFLEGLEK |
Secondary structure | LLLLLLHHHHHHHHHHHLLHHHHHHHHHHHHHHHHLLLEEEEELLLLHHHHHLHHHHLLL LHHHHHHLHHHHHHHHHLLL |
PRMN | LLLLHHHHHHHHHHHHHHHHHHHHHHHHHLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLL LLLLLLLLLLLLLLLLLLLL |
PiMo | iiiiTTTTTTTTTTTTTTTTTTTTTTTTTooooTTTTTTTTTTTTTTTTTTiiiiiiiii iiiiiiiiiiiiiiiiiiii |