NONHSAT035959

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT035959

Source

NONCODE4.0

Same with

,

Classification

sense

Length

2221 nt

Genomic location

chr14+:24439148..24453530

Exon number

2

Exons

24439148..24439541,24451704..24453530

Genome context

Sequence
000001 GGGCGCTCAC GCAACCGCCA CTGTCTGGAG CGGGCTCGCC TCTGCGGCAG CCCTCACCGC CCGGGCTTTA CTGAAGCGGA 000080
000081 GTCTAGCATG TGCGGCTGCT CCACAGCGGT GTGGGTGGCG GCGGCTCCTC TGCAGCAGCC TCGGCAGTAG GGGTCAGGGT 000160
000161 GGCCAAGCCC ACCGTGGAGC TCATCTGAGA GTTGTAAGGT ACGGGACTGC CTCGGTCTTT GGGACGCCCC GTCTGGTAGC 000240
000241 ATCCCAGATC CAGCACGTTC CTTCCGGCCC TGCACCCCGG CCCGGTGCCT CACACCCCGC TACCCCAAGC ATCCAGACTC 000320
000321 TAAGGCAGCC CCTGCATCTC AGTCCTGACA TCGCTGTCCC TGGAGCATCC TCCGCTGGAG CTGGAGCTTG ACAGCCAAGA 000400
000401 CAATCCAAAG CAAAAAGAAC ACAGCTGGAG GCATCACGCT ACCTGACTTC AAACTACTGC AAGGCTACAG TAACCAAGAC 000480
000481 AGCATGGTAA TAGTACCAAA CAGATATCTA GACCAATGGA ATGGAACAGA GGCTGCATAA ATAACACCAC ACACCTACAA 000560
000561 CCATCAGATT TTTGACAAAC CTGACAAAAA CAAGCAATGG GGAAAGGATT CCCTATTTTA TAAATGATGT TGGGAAAGCT 000640
000641 GGCTAGCCGT AGGCAGAAAA CTGAAACTGG ACCCCTTCCT TACACCTTAT ACAAAAAAAC TGAAACTGGA CCCCTTCCTT 000720
000721 ACACCTTATA CAAAAATTAA CTCAATTTTA TTATGTTGTA TTAAATTAAG TTGGGTTTAA TTAAGATGGA TTAAAGACTT 000800
000801 AATTATAAGA CCTAAAACCA TAAAAACCCT AGAAGAAAAC CTAGGCCATA CCATTCAGGA CACGGGTATG GGCAAAGACT 000880
000881 TCATAACTAA AACACCAAAA GCAATGGCAA CGAAGTCCAA ATAGACAAAT TGGACCTGAT TAAACTAAAG AGCTTCAGCA 000960
000961 CAGCAGAAGA GACTATCGTC AGAGTGAACA GGCAACCCAC AGAATGGAAG AAAATTCTTG CAATCTATCC ATCTGACAAG 001040
001041 GGGCTAATAT CCAAAATCTA CAAAGAACTT AAACAAATTT ACAAGGAAAA ACACAAACAA CCCCATCAAA AAGTGGGCTA 001120
001121 AGGATGTGAA CAGACACTTC TCAAAAGAAA ACATTTATGC AGCCAACAAA CATGAAAAAA AGTTCATCAT CACTGCTCAT 001200
001201 TAGAGACATG CAAATCAAAA CCACAATGAG ATACCATCCC ACACCAGTTA GAATGGCAAT CATTAAAATG TCAGGAAACA 001280
001281 ACAGATGCTG GAGAGGATGT GGAGAAATAG GAACACTTTT ACACTGTTGG TGGTAGTGTA AATTAGTTCA ACCGTTGTGG 001360
001361 AAGACAGTGT GACCATTCCT CAAAGACCTA TAACCTGAAA CACCATTTGA CCCAGCAATC CCATTACTGG GTATATATCC 001440
001441 AAAGGATTAT AAATCATTCT ACTATAAAGA CACATGCACA CATATGCTTA TTGCAGCACT GTTCACAGTA GCAAAGACTT 001520
001521 GGAACCAACC CAAATGCCCA TCAATGATAG ACTGCATAAA GAAAATGGGG CACATATACA CCATGGAATA CTATGCAGCC 001600
001601 ATAAAAAAAG ATGAGTTCAT GTCCTTTGCA GGGACATGGA TGAAGCTGGA AACCATCATT CTCAGCAAAC TAACACAAAA 001680
001681 ACAGAAAACC AAACACCACA TGTTCTCACT CATAAGTGGG AGTGGAACAA TGAGAACACA TGGACACAGG GAGGGGAACA 001760
001761 TCACACACCA GGGCCTGTTG GGTTTATAGG GGGCTGGGGA AGGGATAGCA TTAGGAGAAA TACTTAATAT AGATGACGTG 001840
001841 TTGATGGGTG CGGTAAACCA CCATGGCACG TTTATACCTA TATAACAAAC CTGCAAGTTC TGCACATGTA TCTCAGAACT 001920
001921 TAAAGTATAA TAATTTAAAA AAAGAAAAAA TGTAAAAAAA AGAAATTAAA AAGAGTTGGA GCATAGAAGA AAGAAAAGAA 002000
002001 ATGCAATTTG AAGGGCAGTA TGTGCAGTGT AATCTCATTT GTGGAAACAA TTTTTAAAAG AAAAATGCAT GTAAATGTAT 002080
002081 AGGAAACTTC TGGAAAGATA CACAAAGCCA AGAGCTGTAT GGGAAGAAGG TAAAAGAACC ATAGGGAAGA GTTACCTTTT 002160
002161 ACTTTTCACA TAACTTTCTT TCCCTTTTTA AAATAATAAG CATGTTTTAT TTTTATAATT T
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Predicted Small Protein

Name NONHSAT035959_smProtein_623:739
Length 39
Molecular weight 4390.1317
Aromaticity 0.105263157895
Instability index 41.0578947368
Isoelectric point 9.90020751953
Runs 7
Runs residual 0.0115997229917
Runs probability 0.0328059151588
Amino acid sequence MMLGKLASRRQKTETGPLPYTLYKKTETGPLPYTLYKN
Secondary structure LLLHHHLLLLLLLLLLLLLLEEEELLLLLLLLLEEEEL
PRMN -
PiMo -