NONHSAT035959
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT035959 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
2221 nt |
Genomic location |
chr14+:24439148..24453530 |
Exon number |
2 |
Exons |
24439148..24439541,24451704..24453530 |
Genome context |
|
Sequence |
000001 GGGCGCTCAC GCAACCGCCA CTGTCTGGAG CGGGCTCGCC TCTGCGGCAG CCCTCACCGC CCGGGCTTTA CTGAAGCGGA 000080
000081 GTCTAGCATG TGCGGCTGCT CCACAGCGGT GTGGGTGGCG GCGGCTCCTC TGCAGCAGCC TCGGCAGTAG GGGTCAGGGT 000160 000161 GGCCAAGCCC ACCGTGGAGC TCATCTGAGA GTTGTAAGGT ACGGGACTGC CTCGGTCTTT GGGACGCCCC GTCTGGTAGC 000240 000241 ATCCCAGATC CAGCACGTTC CTTCCGGCCC TGCACCCCGG CCCGGTGCCT CACACCCCGC TACCCCAAGC ATCCAGACTC 000320 000321 TAAGGCAGCC CCTGCATCTC AGTCCTGACA TCGCTGTCCC TGGAGCATCC TCCGCTGGAG CTGGAGCTTG ACAGCCAAGA 000400 000401 CAATCCAAAG CAAAAAGAAC ACAGCTGGAG GCATCACGCT ACCTGACTTC AAACTACTGC AAGGCTACAG TAACCAAGAC 000480 000481 AGCATGGTAA TAGTACCAAA CAGATATCTA GACCAATGGA ATGGAACAGA GGCTGCATAA ATAACACCAC ACACCTACAA 000560 000561 CCATCAGATT TTTGACAAAC CTGACAAAAA CAAGCAATGG GGAAAGGATT CCCTATTTTA TAAATGATGT TGGGAAAGCT 000640 000641 GGCTAGCCGT AGGCAGAAAA CTGAAACTGG ACCCCTTCCT TACACCTTAT ACAAAAAAAC TGAAACTGGA CCCCTTCCTT 000720 000721 ACACCTTATA CAAAAATTAA CTCAATTTTA TTATGTTGTA TTAAATTAAG TTGGGTTTAA TTAAGATGGA TTAAAGACTT 000800 000801 AATTATAAGA CCTAAAACCA TAAAAACCCT AGAAGAAAAC CTAGGCCATA CCATTCAGGA CACGGGTATG GGCAAAGACT 000880 000881 TCATAACTAA AACACCAAAA GCAATGGCAA CGAAGTCCAA ATAGACAAAT TGGACCTGAT TAAACTAAAG AGCTTCAGCA 000960 000961 CAGCAGAAGA GACTATCGTC AGAGTGAACA GGCAACCCAC AGAATGGAAG AAAATTCTTG CAATCTATCC ATCTGACAAG 001040 001041 GGGCTAATAT CCAAAATCTA CAAAGAACTT AAACAAATTT ACAAGGAAAA ACACAAACAA CCCCATCAAA AAGTGGGCTA 001120 001121 AGGATGTGAA CAGACACTTC TCAAAAGAAA ACATTTATGC AGCCAACAAA CATGAAAAAA AGTTCATCAT CACTGCTCAT 001200 001201 TAGAGACATG CAAATCAAAA CCACAATGAG ATACCATCCC ACACCAGTTA GAATGGCAAT CATTAAAATG TCAGGAAACA 001280 001281 ACAGATGCTG GAGAGGATGT GGAGAAATAG GAACACTTTT ACACTGTTGG TGGTAGTGTA AATTAGTTCA ACCGTTGTGG 001360 001361 AAGACAGTGT GACCATTCCT CAAAGACCTA TAACCTGAAA CACCATTTGA CCCAGCAATC CCATTACTGG GTATATATCC 001440 001441 AAAGGATTAT AAATCATTCT ACTATAAAGA CACATGCACA CATATGCTTA TTGCAGCACT GTTCACAGTA GCAAAGACTT 001520 001521 GGAACCAACC CAAATGCCCA TCAATGATAG ACTGCATAAA GAAAATGGGG CACATATACA CCATGGAATA CTATGCAGCC 001600 001601 ATAAAAAAAG ATGAGTTCAT GTCCTTTGCA GGGACATGGA TGAAGCTGGA AACCATCATT CTCAGCAAAC TAACACAAAA 001680 001681 ACAGAAAACC AAACACCACA TGTTCTCACT CATAAGTGGG AGTGGAACAA TGAGAACACA TGGACACAGG GAGGGGAACA 001760 001761 TCACACACCA GGGCCTGTTG GGTTTATAGG GGGCTGGGGA AGGGATAGCA TTAGGAGAAA TACTTAATAT AGATGACGTG 001840 001841 TTGATGGGTG CGGTAAACCA CCATGGCACG TTTATACCTA TATAACAAAC CTGCAAGTTC TGCACATGTA TCTCAGAACT 001920 001921 TAAAGTATAA TAATTTAAAA AAAGAAAAAA TGTAAAAAAA AGAAATTAAA AAGAGTTGGA GCATAGAAGA AAGAAAAGAA 002000 002001 ATGCAATTTG AAGGGCAGTA TGTGCAGTGT AATCTCATTT GTGGAAACAA TTTTTAAAAG AAAAATGCAT GTAAATGTAT 002080 002081 AGGAAACTTC TGGAAAGATA CACAAAGCCA AGAGCTGTAT GGGAAGAAGG TAAAAGAACC ATAGGGAAGA GTTACCTTTT 002160 002161 ACTTTTCACA TAACTTTCTT TCCCTTTTTA AAATAATAAG CATGTTTTAT TTTTATAATT T |
Predicted Small Protein
Name | NONHSAT035959_smProtein_623:739 |
Length | 39 |
Molecular weight | 4390.1317 |
Aromaticity | 0.105263157895 |
Instability index | 41.0578947368 |
Isoelectric point | 9.90020751953 |
Runs | 7 |
Runs residual | 0.0115997229917 |
Runs probability | 0.0328059151588 |
Amino acid sequence | MMLGKLASRRQKTETGPLPYTLYKKTETGPLPYTLYKN |
Secondary structure | LLLHHHLLLLLLLLLLLLLLEEEELLLLLLLLLEEEEL |
PRMN | - |
PiMo | - |