NONHSAT036029

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT036029

Source

NONCODE4.0

Same with

,

Classification

sense

Length

565 nt

Genomic location

chr14-:24709001..24709804

Exon number

3

Exons

24709001..24709137,24709270..24709361,24709469..24709804

Genome context

Sequence
000001 CTCACCAACC CAGGTCATAT CTAAGCCTGA GAGCAAGGAA GAACATGCGA TATACACAGC AGACCTAGCC ATGGGCACAA 000080
000081 GAGCAGCCTC CACTGGGAAG TCTAAGAGTC CATGCCAGAC CCTGGGGGGA AGGGCTCTGA AGGAGAACCC AGTTGACTTG 000160
000161 CCTGCCACAG AGCAAAAGGA GTGAGTGGAA CAGAGTTGCT TCTTACTAGG AGCACATTCT TTGCCTGCCT TCCCTTCATC 000240
000241 CTATCCTCTT TGCTTGCTCT CACCTCAGGA ATTGCTTGGA TTGCTACATG GACCCCCTGA GACTATCATT ATTACCTCCT 000320
000321 AGGGCCAGGA AGCCAGTGTG TCCTCCGTCT CTGTGCAGCT CCGTCATTAC CATAGGGGAC TTGGTTTTAG ACTCTGATGA 000400
000401 GGAAGAAAAT GGCCAGGGGG AAGGAAAGGA ATCTCTGGAA AACTATCAGA AGACAAAGTT TGACACCTTG ATACCCACTC 000480
000481 TCTGTGAATA CCTACCCCCT TCTGGCCACG GTGCCATACC TGTTTCTTCC TGTGACTGTA GAGACAGTTC TAGACCTTTG 000560
000561 TGATA
[back to top]

Predicted Small Protein

Name NONHSAT036029_smProtein_287:562
Length 92
Molecular weight 9885.1187
Aromaticity 0.032967032967
Instability index 54.8956043956
Isoelectric point 4.67083740234
Runs 11
Runs residual 0.0125915750916
Runs probability 0.0291628526922
Amino acid sequence MDPLRLSLLPPRARKPVCPPSLCSSVITIGDLVLDSDEEENGQGEGKESLENYQKTKFDT
LIPTLCEYLPPSGHGAIPVSSCDCRDSSRPL
Secondary structure LLLEELLLLLLLLLLLLLLLLLLEEEEEEELEEELLLLLLLLLLLLLLHHHHHHLLLLLL
LLLLHHHLLLLLLLLLLLLLLLLLLLLLLLL
PRMN -
PiMo -