NONHSAT036308
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT036308 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(S) |
Length |
1494 nt |
Genomic location |
chr14+:33245370..33246860 |
Exon number |
1 |
Exons |
33245370..33246860 |
Genome context |
|
Sequence |
000001 CGTTGGGACT TTCACTTCTT TGATATGGTT TGTCTGTGTC CCCAACCAAA TCTCCTCTTG AATTGTAGCT CCCATAATTC 000080
000081 CTAGATGTTG TGGGAGGGAC CGAGTGGGAG ATAATTGAAT CATGGGGGTG GTTTCCCCCA TACTGTTCTC ATGGTAGTGA 000160 000161 ATAAGTCTCA CTAGATCTGA TGGTTTTATA AGGGGAAACC CCTTTCACTT GGTTGTCATT CTCTCTTGTC TGTTGCCATG 000240 000241 TAAGATGTGC CTTTTGCCTT CCACCATGAT TGTGAGGCCT CCCCAGCCAC ATGGAACTGT GAGTTCATTA AACCTCTTTT 000320 000321 TCTTTATAAA TTATTCAGTC TTGGGTATGT CTTTATCAGC AGTGTGAAAA CAGACTAATA CACTGCTATA TCCCCCAGGG 000400 000401 CCTGGGAAAT ACTTGCACAT AGTAGGTCTA CAAATAAGTA TTTGCTGAAT GAATGAGTAC ATGTGTTCAT TTAATAAATT 000480 000481 TTGTTTCATT CTGGCATTTG ATTTGGAGTT ACTGTATCTA TATTCTAAAT TTTTACATTT TTTCACAAAG TAGCTGAGTG 000560 000561 TTATGTTTCT ATAAGAACAC CAAGAAGATG ATCTTTAATC TTTCTTGCTT AATAAGGCCT CCCCAGACTC TCAGACCTGT 000640 000641 TTCCTAAACT CAAGGAGACT GTCAGTCTCT AAGTGGAGTC TAAGGAGGCT AAAGTGGCTA ACATTGCTAC AGGGCAGAGT 000720 000721 GCCAAAGGGG AAAGGGCTAC ACAGACAGGG CGCACCGGAG ATATACAGAG GGATGCTCTC AAGTACTCAG CAGAAGGAAC 000800 000801 CACCTGAAAG GATTAGAGGG AACACTCCCT GGAGCTTGCA CAGAGCTAGA AATCATTCCC TTTTCCCTCA CTCATAGTAG 000880 000881 AAACCCTCAT CATTCACAAG GCATGTGATA GGGTACCAAG AAAAGTTTTT GCCTTAGTAA TGGGGCAAAC TTAGACTAAA 000960 000961 TGCTGCTCTG GTCTTGCCCA AAAAAAAAAC TTAAAAGCAA GACCTGAAAG GATCAAACTG TTTCAAAGTA ATTTAACTAT 001040 001041 ACTCCCAGGA CAAAGCTCAA GAATATTTAT AGGAATACAA ATACCCAACA TACAACAAGT TAAAATTTAT AAAATTTATA 001120 001121 TTGTCTGGCA TCCAATCTAA ACCTACCAGG AATGGAAAGA AGCAGGAATA GTCAGCTGAT GTGAATATGA ATATTAATCA 001200 001201 ATATAAACTG ATCCAGAAAT GTCACAGAGT ATAGAATTGG TAGACAAACA TTAAAAGTTA TTATACCCGC ATTCCATATG 001280 001281 TTCAAGCAGC TGGAAAAAAT ATTGATCATA TTAAGTAGAG ACATTAAAAA TATCTACCTG AAATCACATT ATAAAGAGGA 001360 001361 AAACTATCAT TACTGAGATG AAAAATACAC TGGATGAGAT TAACAGCCAA TTAGACATCA CAGAAGAAAT AATTTGTAAA 001440 001441 CCTGAAAACA TAGCAATAAA AATTGTGCAA AATGAAGCAA AAAAAGAAAA AAAA |
Predicted Small Protein
Name | NONHSAT036308_smProtein_452:556 |
Length | 35 |
Molecular weight | 4163.8352 |
Aromaticity | 0.264705882353 |
Instability index | 58.0414705882 |
Isoelectric point | 6.67889404297 |
Runs | 5 |
Runs residual | 0.0390915860015 |
Runs probability | 0.00362126832714 |
Amino acid sequence | MSTCVHLINFVSFWHLIWSYCIYILNFYIFSQSS |
Secondary structure | LLEEEHHHHHHHHHHHHHHHHHHHHHHEEEELLL |
PRMN | LLLLLLLHHHHHHHHHHHHHHHHHHHHHLLLLLL |
PiMo | oooooooTTTTTTTTTTTTTTTTTTTTTiiiiii |