NONHSAT036395
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT036395 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(S) |
Length |
2537 nt |
Genomic location |
chr14-:36263047..36265529 |
Exon number |
2 |
Exons |
36263047..36263985,36264455..36265529 |
Genome context |
|
Sequence |
000001 TAGTTTCTAT TGCTATGTCT TCAAGTTCAC TAATCTTTTC TTCTGCTACA TGTAATCTGC CATTCTATCT AGTTTATTTT 000080
000081 TTAATCTCAG AAACTGTAGT TTTTATCTAG TTCATCTTGG GTCTTGTTTT ATATCATCTA TGTGTCTTCT TAACTTTTTG 000160 000161 AACATATGGA ATACAGCTAA AATGATATAC TTCTCTGCTA ATTGTGACAT CTCTTTCAGT TCTAGAATTT CAATTGATCA 000240 000241 TCCTCTTTTC TTATCCTGGG TTGTTTTCCT GATTCTTTGT GTGCCTGGTA ACTTTTGGCT ATCTGATATT CTGAATTTTA 000320 000321 CTTTCTTATA TTTTGGATAT TTTCCTATAT CTGTAAATTC TTTTTTTGTT TCGTTCTGTT TTTGGGGGCA GGGTCTCAGT 000400 000401 CTGTCACAAC CTCCTGGGCT CAGGCAATCC TCCTGCCTCA GCTTCCCGAG TAGCTGGGAA CTACAGGTGC ATGCCACCAC 000480 000481 ACCCAGCTAA TTTTTTTTTT TTTTTTTTTG GTAGAGAAAT GGGGTTTTGC TATGTTGCCC AGGCTGGCCT CGGGCTCCTG 000560 000561 GTCGCAAGTG ATCTGCCCAC CTTGGCCTCC CAGGGTGCTG GGATTACAGG TGTGAGCCAC CGTGTGTGGC CACCTATAAA 000640 000641 TTCTTGAGCT TTTTTCCGGG ATACAATCAA GTTATTTGAA AACAGTTTTA TTATTTTGGG TCTTGCTTTT ATGATTTGTT 000720 000721 GGGTGGGTCC ATTTAGGGTT AATTATTGTC TAGTATAAGG CAATACCTTC CTGAGTATTC GACCCAAGGC CCCACAAATT 000800 000801 ATGAGATTTT ATTTTTATAG TCCAGCTTTT GGGAACAAGC ACTCTTCCCA GCTCTGTGTG AGCACCTGGT ACTGTTCCCT 000880 000881 CCAATACTTC AGCATGGTTC TTTCTTCTGT CTTGGGTAGT TTCCTCATAA GTATACTATC ATCATACTTA AAGGGGACCC 000960 000961 TCTCTAGTCT CCTGGATTCT CACTGTGTGT AGCTGTCTCC TTCTTGGTGC TGTGTCGTGT GAACTCTGAT TGCCTTGGTC 001040 001041 TTCCTGGGTG CTTGGCTTCA CTTTCTTAAT TCATGAAATG ACTTAAAAAG AGTATGGATT GGCCGGTCAC AGTGGCTCAC 001120 001121 GCCTTAATCC CAGCACTTTG GGAGGCCGAG GTGGGCGGAT CACGAGGTCA GGAGATGAGA CCATCCTGGC TAACACGGTG 001200 001201 AAACCCCGTC TCTACTAAAA ATACAAAAAA ATTAGCCGGG CGCCGTGGCG GGCGCCTGTA GTCCCAGCTA CTCGGGAGGC 001280 001281 TGAGGCAGGA GAATGGCGTG AACCCAGGAG GCGGAGCTTG CAGTGAGCCG AGACTGCGCC ACTGCACTCC AGCCTGGGCA 001360 001361 ACGGAGGGAG ACTCCATCTC AAAACAAAAA AACAAAAAGA AAACAAAAAA AATAGTATGG ATTAACAGAT TTGGCTGAAA 001440 001441 ATCTAAGAAT GTGTGAACTG TAACCTGCCT ATAAAAGTAA GCCAACTAAC TGTATATGCG TGTGTGTGTG CATATATATA 001520 001521 GATATATATA AAATAAATTT ATATAGAGAT GGGGGTTTCC CTATGTTGCC CTGACTGGTC TTAAACTCCT GGGCTCAAGT 001600 001601 TATCTGACCG CCTCGACCTC CCAAAGTGCT GGGATTACAG GCATGAGCCA CTGTGCGCAG CCAAACTTGA TTATTTTTAG 001680 001681 AGTTTGATAT ACAGTGTTAG TAATCCTGTA TACATGACAT TAGATGCTTT TAAATTCTTT AATTTATATA TAATGTAATG 001760 001761 TATGTTCTTT AATTTAAATC TGTCTGATTT GAAAAATGAA CTTGACCTCA TTGAACTACT TTATATATTT ATGAAGAATT 001840 001841 GATTTACTTT GCAGATTATT GACATAAAGT GTTACTGATT GACCTTAACA GAACAAGCTT TTTCAAATAT TGTAATCATC 001920 001921 TTTATATTAA CATTTTGTTT ATTAAGGATT TTATTGCATC TAAAGGATTT TACGTGGCTT ATAGGATTGA ATAAAATGTG 002000 002001 GAATAGAACA ATTATCTCTT GAGACTTCAC TTCAGCTTCA CTGACTTCTG GATTCTCCTC TTGAGTAAAA GGACTCAGCC 002080 002081 AACTATGAAG TTTTTTGTTT TTGCTTTAAT CTTGGCTCTC ATGCTTTCCA TGACTGGAGC TGATTCACAT GCAAAGAGAC 002160 002161 ATCATGGGTA TAAAAGAAAA TTCCATGAAA AGCATCATTC ACATCGAGGC TATAGATCAA ATTATCTGTA TGACAATTGA 002240 002241 TATCTTCAGT AATCATGGGG CATGATTATG GAGGTTTGAC TGGCAAATTC GCTTTGGACT CGTGTATTCT CATTTGTCAT 002320 002321 ACCGCATCAC ACTACCACTG CTTTTTGAAG AATTATCATA AGGCAATGCA GAATAAAAGA AATACCATGA TTTAGTGAAT 002400 002401 TCTGTGTTTC AGGATACTTC CCTTCCTAAT TATCATTTGA TTAGATACTT GCAATTTAAA TGTTAAGCTG TTTTCACTGC 002480 002481 TGTTTCTGAG TAATAGAAAT TCATTCCTCT CCAAAAGCAA TAAAATTCAA GCACATT |
Predicted Small Protein
Name | NONHSAT036395_smProtein_800:991 |
Length | 64 |
Molecular weight | 7102.1677 |
Aromaticity | 0.174603174603 |
Instability index | 47.9923809524 |
Isoelectric point | 8.55352783203 |
Runs | 6 |
Runs residual | 0.0497246517655 |
Runs probability | 0.0716157333805 |
Amino acid sequence | MRFYFYSPAFGNKHSSQLCVSTWYCSLQYFSMVLSSVLGSFLISILSSYLKGTLSSLLDS HCV |
Secondary structure | LEEEEELLLLLLLLLLLEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHL LLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLL LLL |
PiMo | iiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTToooooooooooooo ooo |