NONHSAT036897
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT036897 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
890 nt |
Genomic location |
chr14+:53177264..53180750 |
Exon number |
3 |
Exons |
53177264..53177886,53178128..53178242,53180599..53180750 |
Genome context |
|
Sequence |
000001 AACCTAATGT GTAATGTGTT CAGCATGTGC CTGTCATGTA GCAAAGGCAT GAGTGATGGT TGCTGGGTTT TGGGGCTTTA 000080
000081 AATTTAAAGC ATTTTAATAA AAATCTCTAA GGGGAAACCG TGCATTTTTC TCTACTCTCA TGAGCATTTA ACACATTCTT 000160 000161 CCCAGAAGCT GTACATTTCA AAATAAATCT GATGAGCACA CCTTTAAAAT GCTTCCCTTT CCTTTCCCTA AAATGTTCAC 000240 000241 TAAGGGATTT TTCTATAAAT GCTTTGGTAG CAATTCCCAA AGTCACTGTA CCATTGCTGC CTCAAGCTTT GTGTGTTAGT 000320 000321 CATTTCACAT TTTACACTGA GATTACACAA AGGGGCATGC TTTTAAGGAG CAGGTGGAAA TCACTTTGAA TTACTTATTT 000400 000401 TATAAGCCAT TTTGTTAGCA TAGAGTTTAT AATCTGATAT TTGTGTTCTC TCTGGAGGGT AAAAATGAGT GTTTGGCTTC 000480 000481 TAAATATTAA ACTCTCGTTA GAGTGTTATT CCGTTTTTAA GTGTTGATGT AATATCTTTT GTTTTACAAA ACTAGCTTGA 000560 000561 CAAAAGTAAG CTGAAGCCAG GAACAAGAGT TGCTTTGGAT ATGACTACAC TAACTATCAT GAGATATTTG CCGAGAGAGG 000640 000641 TGGATCCACT GGTTTATAAC ATGTCTCATG AGGACCCTGG GAATGTTTCT TATTCTGAGA TTGGAGGGCT ATCAGAACAG 000720 000721 ATCCGGGAAT TAAGAGAGGT GATAGAATTA CCTCTTACAA ACCCAGAGTT ATTTCAGCGT GTAGGAATAA TACCTCCAAA 000800 000801 AGGCTGTTTG TTATATGGAC CACCAGGTTG GTATTGAATT ATTTCTACTC CACCAATAAG ATAAATGAAT TAAGGAATTA 000880 000881 AAAAAAAAAA |
Predicted Small Protein
Name | NONHSAT036897_smProtein_191:388 |
Length | 66 |
Molecular weight | 7415.8738 |
Aromaticity | 0.107692307692 |
Instability index | 55.3678461538 |
Isoelectric point | 9.92559814453 |
Runs | 10 |
Runs residual | 0.00355769230769 |
Runs probability | 0.0455131602191 |
Amino acid sequence | MSTPLKCFPFLSLKCSLRDFSINALVAIPKVTVPLLPQALCVSHFTFYTEITQRGMLLRS RWKSL |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLHHHHHHLLLLLLLLLLHHHHHLLLEEHHHHHHHHHLHHH HHHLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLL LLLLL |
PiMo | oooooooooooooooooooooTTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiiiiiii iiiii |