NONHSAT037010
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT037010 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1364 nt |
Genomic location |
chr14+:55964856..55966219 |
Exon number |
1 |
Exons |
55964856..55966219 |
Genome context |
|
Sequence |
000001 actcctgacc tcaggtgatc tgcccacctc ggcctcccaa actgctggga ttacaggtgt gagccattgc accGAGCTTG 000080
000081 CATATATATT TTTCAAAGGG ATATGCAAAT ACTGTTAATT GTGTTACAAT TTTGGCCAGA AATGAAGCCC CTGGGGCCAG 000160 000161 TCCGAGAATG CTGCAGTGTT TTGCCAATTT TAAACCTGTT TTCATTCCTT CTTTGATTTC TGGATGAAGT ATGAGCCACT 000240 000241 TTTATCATTC TGCATAGATG GTTATCAGCC CGGCTGTTCC CTCATCAAAT TAATTAATAA AGATTCCAAA TGAGTCATAA 000320 000321 TTTCATCCAA GGAGTAATTT TGGCAAGAGG ATGACTTGGC TGAAGTTTCT CACTTGTCTT TCTCCAAAGA GAACATTAGT 000400 000401 CTTAAGAGTC TTGGCCACAT TCTGTACTGC ATCCCTGTGG ACCATCACCT GCCATTGGAT GGAGTGGGGT TTCCCTACTC 000480 000481 TAAAGATGAC AACACAGAGA ATAAAATCTC TACTATACTC ACATGTTTCA AGGGAAAAAT AAACCTAATA ACTATTTAGG 000560 000561 TGGGAAATgg ctttggagtc tgataagtca ggattgaaat actgttttca tcagttattt gctatataac ttcagTTTCC 000640 000641 TGTCTAAAAA TGGAGTAATA ATTCTGTAAC CCACATGCAA GTAGACCTTG TTAAATTACC GTATGCTTAT ATAAGATTGA 000720 000721 GCTCAGCCTA TTGACATTTT TGGGAAAAAT AAAAGCCAGA ATCTGCAATG AGAAGTAATG AAGACTTATG ACTAGAGGTT 000800 000801 ACTCAGGAAA AAATAAGACT ATTGCATTAT ATATCACATA AGCAAGTTTC TCTAAAACTC CTCTTTAAGC ATTTTTACTT 000880 000881 CCACCCACCG CACCCCTCCA TCACCATTGC AGTACCTACA TCCATTTTCA TAtgcattag ttagggtaat gcctagctag 000960 000961 tataacagag tcccaaaatc caaaatgcag tggtttaaAG GAAAAAGATG ctctctgtct ctgtctgtct ctctctctct 001040 001041 ctcCCCACCC CTTTCACAAC AGCTAAGATA TAAATAATCC TGGCCAGCAG GGCAGCTCTG TTCTCTTGTT ATTCAACAAC 001120 001121 CCAGGTTATT TCTAAACCGT AGCTCTGCAT TGTCATTATC TGCATAATAT GATAAAAGTA TATGGATTCT AGATGGAGGG 001200 001201 AAGGGAAAAG AGAGTGTGAA GGAGGCACAG CTCTGTGTCT GAAGATCCAG GCTCATAAGT GCACATTTCA CTTCTTCTtg 001280 001281 ttaccggaaa ggggtcccaa tccagacccc aagagacggt tcgtggatct cgcccaagaa agaattcagg gcacgcctgt 001360 001361 aaag |
Predicted Small Protein
Name | NONHSAT037010_smProtein_350:541 |
Length | 64 |
Molecular weight | 7491.9535 |
Aromaticity | 0.126984126984 |
Instability index | 45.7634920635 |
Isoelectric point | 10.0573120117 |
Runs | 9 |
Runs residual | 0.00210560414642 |
Runs probability | 0.0515122966105 |
Amino acid sequence | MTWLKFLTCLSPKRTLVLRVLATFCTASLWTITCHWMEWGFPTLKMTTQRIKSLLYSHVS REK |
Secondary structure | LLHHHHHEELLLLLEEEHHHHHHHHHHHHHHHHHHHHHLLLLLLLLHHHHHHHHHHHHLL LLL |
PRMN | LLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLL LLL |
PiMo | iiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTooooooooooooooooooooooo ooo |