NONHSAT037041
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT037041 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1162 nt |
Genomic location |
chr14+:56777598..56812256 |
Exon number |
4 |
Exons |
56777598..56777820,56788204..56788329,56792822..56793190,56811812..56812256 |
Genome context |
|
Sequence |
000001 AGTTGCTACT ATTCTAATCG CAAAGTCAAG AGTTCCTTCT TTTCTTAGCT GCCTTCAGTG CCACAGAACT ATCTGGGCCT 000080
000081 CTTCCTCTAC CCCTCCTTGT GTGATCGCTC CTTTCAAAAG CAACAGCCAA AGCAGATGCA AGGGAGATGC ATTGGTGCTC 000160 000161 ATAAATTCAA GGAGCTGAAA TGGCAACAGC TGTGGCAATT TCAGGATTTC AGCAGGTAAT CAAATGGGTC AAAATCAAAG 000240 000241 TTGATGATCA GTCATATGAT CTTCAGCAGC CCTGGAAGGG TGTGAGTTCT CGGCATCCCA TGCAGGAGCT CTGAATGTAC 000320 000321 AAGAGGTGCT GAGGAGGGAG CATGCGCCGA TTCTCCCCCT GCAAGGAACC ATGTAAGGCA ATCAAAAGAC ATAACAATAA 000400 000401 CCAACATCCA CGCAACTCCT GCCAGGTGCC AAACGCTGGA TGACCTCACT ATCCTCATGG AAAAGGAGGT GGTAAGTACT 000480 000481 GCTCATATCT TCTTCATTTT CCTTTTGAGG GAACCAAGAC ACAGAACGAT AAAGTAACTT GCTTAGGTTA CACCATTAGT 000560 000561 GAGAGGCACA GCTCGGTTTC AAACCCAAAC TGAGCTATTA ATATTTCAGT AAAGCACCTT TATATAAATA AGGAGGTAGT 000640 000641 TCCTAAGATC TTATCATGGC TGTGCGGCTG CAGATCTCTT CACTACTCCA AGCCCTTTTT TTTTTTTTTT TTTTTTTTTT 000720 000721 TATAAATTAC ACAGCCTTGG GTATTTCTTT ACAGCAGTGT GAAAATGGAC TAATACAGCT GCTGACTCTT CCTCCTATGA 000800 000801 CAGATGAGTT CTTAGTTCAC TTACATTACT CCCTTTCTTT CTCACAACAC AGTTACATTG CTCTTGTAAA GTCCTCTCTA 000880 000881 TGTTACTTTT TTCACTACAA ATAATATGAC TAAACTTCTT ATTTTTAATC CTATTAGTGA TAGGTAAATT ATCTTGTCTC 000960 000961 CTCGCTTTAT AATATGAAGA TAGAGTGCAG TTGCAATATG TGTGCACTTA GCTCATACGT ATTAGCTAAC TTCATCTGGC 001040 001041 CAGAAAAGAA GAAAGTGGGT ATGAGGAAGA AGTGAGAGAG AAAACGGGGG CAGGAGGAAG ACAGGCCGAG GGGGTGTGGG 001120 001121 GGAGGCAGAA CTCTTAAATG TGTGAATGAT GATTTCAGCT GC |
Predicted Small Protein
Name | NONHSAT037041_smProtein_179:313 |
Length | 45 |
Molecular weight | 5044.7625 |
Aromaticity | 0.0909090909091 |
Instability index | 43.8977272727 |
Isoelectric point | 8.16107177734 |
Runs | 8 |
Runs residual | 0.0187165775401 |
Runs probability | 0.0235272036743 |
Amino acid sequence | MATAVAISGFQQVIKWVKIKVDDQSYDLQQPWKGVSSRHPMQEL |
Secondary structure | LEEEEELLHHHHEELEEEEEELLLLLLLLLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |