NONHSAT037288

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT037288

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

6635 nt

Genomic location

chr14+:62584075..62600903

Exon number

4

Exons

62584075..62584306,62585409..62585532,62594515..62594630,62594741..62600903

Genome context

Sequence
000001 GAACAGCTGC GCGCCCGCCT AGCGCTGCGA ACCCGGAGTG AGAGGCGCTT CAGAGACTGG AGGGACGGAC CTGCAGGAGC 000080
000081 CAGGGCTGCC CGCCGAGCTG CAGTTGCCGC TACTGCCGCT GTCAGCGCCC GACTGAAGAG TGACAGCCGC AAAAGCAGGA 000160
000161 GTGAGCACCG AACCCCGCGC TTCTACCTAA CAGGTGCATG CGCCGATCTG GTGAGTGGAC CCAGCTCACA AGATCTCAGG 000240
000241 TAACCATTCA TGAGCCTGAG GCTGTGAGAA ATGCTCGCTG TGCAAAGGGG AACTCTCACC AGATTTTCTG AAACTGTTCT 000320
000321 AGAAATACAC TTTTCGGATT GATTCAGCAT TACCAGCTTA TCCAACAAAA GTATTAACAT ATACATTAAC AACGTCGAAA 000400
000401 GTAGCCTACT TTAAGAGAAA ATATGCAGAA GAAGAAGATT TACATCAAGA TTACCATGGG TATTTTCCAA AACACCTGAT 000480
000481 ATTACCTGAG GACAGAACTT GCATTCTCAA ACTTTCTCTG GAGAAGCTCA GGTTTCTTGA AGACCCAGAA ACCTACTTAA 000560
000561 GAAGGTCTGT GTTAATTAAC AATTTGCTGA GGAAGATACA TCTAGAGACG GAGAAAGAGA GCTATGAATA CTTTAAAGAA 000640
000641 GCTCCCTGTT ATAAGACTGC ATATTCTGAT ACAAGAAAAC GGCTGAAGTT TATGGTACAG GAATGCTGTT CTCAGTCTCT 000720
000721 CTATTATGAA GAGCTGCATT CGTATCATAT TGTGCCTTAT GCTTCGGAGA ATGCCATTTA TGAAATGGGC TACACTAGCA 000800
000801 GCCACTTGGA GCAAAATTCT CAGTTGCTTA TTTATAAAAT GAATTAAAGT AACTGTTAAG TCCATTGATA CTTTGTTTCT 000880
000881 AAATGCTTGA ACTGTTTATA GTGAAGATGT TAATATAAGG CACTCATTAC CAGTGCACTT GATATCAAAG ATGAGATGCA 000960
000961 TGCTGAACTG ATTGGAGAGA GCAATGGTTA TTACTCAGCA GTCCTTAGAA TCATCAAATT GAATAGAAAA TATGTTCACA 001040
001041 TATGATAAAG CGGTCAATTA GTGCTTTAGA AGCAAAGATT TTTTTTAAAC ATAAGATGTG TAGGAAGGGG CCTACGTTAA 001120
001121 ACAATTACAC AGATGAAAAA TTTTCTTTTA TGCCTTGATT TCCAAATTCT GCCACTCTTA CTGGAAAGTA ATGAAAGTAA 001200
001201 CAGATTAAAT TGATAATGCC ATGTCCCTGA GGATGAAGGG TGGAACACAT TTAATTTTCT GTAAATGATA TGAGGAAGGG 001280
001281 CTGGTTCTTT CTGAAGTGCT TTGACTTGTC AAGCATTGTG CCAAATAATT GACACCATTC TCCTTTTACC ATTAGTAGCA 001360
001361 ATTCGAGATG GGGCAAAGAC ACTGCAACTA AACTGCTGAA TGTAACAACC AGATTACTCC AAACTGATCC ATTGTACTAT 001440
001441 TTTGCGGGGA GGGCTTAGAC TTTTCTCTTT AAAAGTGAAT TTTAACGAAA TAGCCTTGCA GATGGGCTTA TCTATAAGTT 001520
001521 CTACAGGTTG GTTAAAATTT GTGGTGGGCC TTTAGTTAGC CGTTTACATT TTATTTGTTT TTTTTTATAG GCTGTGAAGC 001600
001601 TCAGGAAAAG GGTAGGCAGG TAAAATTTGT TTTTAATGAG TTGATACTTT TTAGAAACCT TATCTGCAAA AATTAATGAG 001680
001681 AACAACAAAT TCCACATGAT GTTATTTCTT CATCTAGCTA AGAGTACATT TAAGGCTGCC TGGATGAAAC TTTGCACTGA 001760
001761 TTTTTGTATA ATAGTTGATC ATTCACTATT TGACAAATTG TTTCAGAATG CCTTTGGTGG TGAAGTTTAG ATAAGTCCCT 001840
001841 ATGTTTTGCA ATTTTACAGA TAATTATTTA ACAAGTTGGA TAGATTCATG AAATTGTTTG AAGTGGTTCA TACTGTTCTT 001920
001921 TCAGGTTTGA GTGAGATGTC AGATTTCAGT GTCTGAAGTT TTGTCCTATG GAGCATATCA TTTAAAGAAT TGTCATTAAC 002000
002001 TGATAAAACA GATTGGAAAA ACTAGGTGCC AAAGGTGTAT TTAAGAAAAT ACCAAAGACT CAAAGATGAG TGTTAGGAAG 002080
002081 ACTATGATAA TGAAGATAAG AATCTAAAGT AAGGATTGCA TAGGACATAG AAGAACATTG TTAAAGGGGT TTGGAATGAT 002160
002161 TTGCTTACTA ATGTACTTTC AGAACACTTT ATACATAATA ATGGTAATCA AGGGCACTGC TTTAAATGAA GATACTACAG 002240
002241 ACCTTTAGGA ATCATATGCC TTGGAAAACA ATCTATGTAT GGTGACTTGT CAACAAAGTA TCTTCCCTAG TTGGATGCCA 002320
002321 ACTTGTAACC AAGAAGACTT TCTTCTATTC AAGAGAAATT TGGTTTTAGT TTTGATTTAA TACTTGGTCC CTCTAATTAA 002400
002401 TCACTGGGGT GATTAACATG AATTCTGTTG GTATAAAGAG TATTGGTTCC CTAATTAGCC TGCATTGTTG AAGACCACAT 002480
002481 AGATGTATTA CTGATAAGAC TATGAGGCTC ATGTTTAATT ACTCAATCAA AATTAGGAAG AAATGCTTTG GAAGAAACTA 002560
002561 AAAAATTACA ATTTAGGTTA ATTTTTAAAG GCAATTTAGT ATACATGATG AGCTAGCTTT GAAATACAGA TTTAAATGTT 002640
002641 TAAAAATTAA TTTGAGGGCA AGATTTGGTA CCAAAGTTTC AAAAATTTTA TTTCACTGCT TATAAAATAC TTTATCAGAA 002720
002721 CACTTATTTT AAAAAATAAC ATCTTATTTG AAAAACTCCA AATTTGATGG GATAGTTACA CCATCATACA ATTTTAAAGG 002800
002801 TAGAATTAGC TTTCTAATAC TTTAAAATAT TTTCTGAAAT GAACATTTCA CTTGGTTTAG GACCGTGTCT GTAAGTAAAA 002880
002881 GACACCAATG CTAATAGATA TGACTTACAA AAATGCCACA TATCGAAATT GATTGAGGAT TGAAATATAT ATACTTTGGC 002960
002961 ATTGAGAAGA GAGGAAGAGA AAAAAATAAA AAAAGTGTGA CATTGTAATA TTTATTGTAT TTAATAAATC TTGAAGAAAG 003040
003041 AACTCTTGAG CAATGAACCA GTGACAGATA TAAAAGCCTG TTTTATTTGA TGACATCATT AACTGAGTTT TCTCATCTAT 003120
003121 ACATTCATAC ATCGAGAAGG AACTGTCTTA AAAACCAGTG TTTCTTTTTT TTTTTAAGTT CTAGCGTACA TGTGCAGAAT 003200
003201 GTGCAGGTTT GTTATATAGG TATACACGTG CCATGGTGGT TTGCTGCACC CATCAACCTG TCATCTACAT TAGGTATTTC 003280
003281 TCCTAATGCT ATCCCTCCCC AGTGATATTT GTTAATATGC TTTTTTAAAA AAGTGTCTGC CTTGAAACTG GTAATTAAAA 003360
003361 AATATCTCCT AGGGCATTTA ATTATTTTTC CCAATAAACA ACTCATAGAT AACGGGTTGA CTAATGTTAT CTTTATTTAG 003440
003441 AAAATTTGTA TGTAAACTGT GTAAACTTGT CTGAGTTAAC CAATAGACTA CCGGGGTTTT AGCATGGTAA ACTGATATAC 003520
003521 AGGGAGACCC AAATACAGGC TTGCTTTGCT GACTACCCAG CGTGCTTTAT TACAGGAGAT GCAAAAGGTG GAAGACCAGT 003600
003601 TACACCTTTT TTTTTTTTTT TTTAAAACCT GGACATCCTT TCTCTGGTGA CAAGAGCCAT CCTTATGGTA AGGAAGGTGA 003680
003681 GATAGAAAAT GGAGAACCTT TGGTAATGTT GATCTTTCTT GTGGGTGTCC ACCTAGCCTA AAAGCCAAGT GAAGAAGAAC 003760
003761 ATAAAAAAGC AGAAGAGGAA AAATGAAGAA AAGAGGAAAA AGAGGGTGGG GCCAGAGAAA TAAAGAGTAG GATTAGTAAG 003840
003841 TGAAAGAAAA AGTTGCTTTG TTGTGTGGGG GGGGTGTTCT TGCTTGCTAT ACTCAATTTT GCTTTCCCGT GTCTGCTGTA 003920
003921 CACAAAACAC CTGATCTCTG CAATGTATTG CTCCTTTCTT TCATTCACCT GTGATGCATA AGACTAGATT ATTTTCGGCA 004000
004001 TATCTACTGT TTGCAAAGTG TTACTACTGA AAAATATCCC TGAAACTGAG CTCTTTGGGT GGATAAGCAA AGGAAAAATA 004080
004081 GAAAATAATT AAGGTAAGGG AAAGGCTAAA GGATAAGCCT GTGTATAAAT GGGAAATGGA TAAGCTCAAA TGCATTATCT 004160
004161 GGTTTCAATG TAACACCCAA GATTTAACAA ACTCAGTGCT AGAAGACTTG AAAATAAGTG TAATTTACCA CCATCTATTG 004240
004241 AGCAGCTATT ATGAGCCAGG CACTGTGCTA GGGCTGGGGA TACATAAGTG AATAATGCAC AGTCCCAGAA CTCAGATTAT 004320
004321 TTGGTTTTGT TTTACCAAAT CCAAATGCAG TACCTGCATT TCTCTTTTCC AAACTGAGAT GGCTATCAAA CATGTCTTTC 004400
004401 AGAAAGTGTT TGCAGGTGAG AAGATGCGCA AGGTGAAGGA AAGTTTTCCT GACCCAGATC TTAGAAGGAA AGGAGAGGAT 004480
004481 ACATTTTGCT TTGTGGCATA TTTATTGTGG GCAAAAAGCT ACTATTGCCT AAGGGAAGTA CGGCTGACCT TAGCCCATCC 004560
004561 CTGGGGCATA TCTTGTGCGT GTGGTGGGGA GACAAATCAG GTAGGGAACA ATTCCTTCTC GCCTTACCTC TCTAGCTTCC 004640
004641 ATGTTCTTTT ATGGAACAAA TCAGATTAAT ACTAATGTTA AGGAGAGCTT TAAAGGAGAA AGAGAATCAA TAAATCACAG 004720
004721 CCTGAAAGTT GTGTATGTTG TGTGCAAGCT CAGAGGGGCA GTCTTCTTCA ATTTGCCTTG TGCTGGTGAA TTGCTTGAAT 004800
004801 GAACTTCGGT ATTTCTTAAC ACCAGGTACT GGAGCCCACC TTCTTTCTCT CCCTCTGGTT TCCTCTTTAA ATCACAGCCT 004880
004881 GACCCCAGTC TTTATAGTCC ATTGTAAGTG GAAGTTATAG CTCTATTCTT CACCCACACC TTGCTCCCTA TCATTGATAC 004960
004961 TTAGAAGAAA GTAACAATTT GCAGTACTGG CTGAACTCCT TTGGGAAAGT TTCTGGAGTG TATCAAATAA GAATTCATCA 005040
005041 TAGTAACATG GTCGTTACTG GCTGAACAAA ATTCTTTTTG AGACTATTGT ACTTAGTCAT TAAATAATTG TTTACTAAGG 005120
005121 CAATTTTCAT GTTTCTGGAA TTCAGTGTAA TAGTTAACAG CTGTATATGT CTCACAAAAG AAACTACTTA GGTTGGAAAC 005200
005201 AATGGAAGGT TGTGTATAAT TAATTCAATC AGGTCATGAA TATTTATGTA ACATATGGCA TTTTAATTTA TATGTTCCCA 005280
005281 TTCTCATACT TCATTACTAT ACAGCAGCAA CAAGATAAAT TTCAGGTTTT TTGTTTTTTT ATTAAGTGGG CCATGTCTAA 005360
005361 AAGTTGTCAC ATTCCTGGTT GAATATTATG GACAAAATTT CCCCATTAAA GTAGTTTTGT CTTTCTCAAG GATTATCCTT 005440
005441 TAGGGTTGGG TGGATTAAAA ACATTACATT AGTGCTTCTT GAGCATACAA GTCACTAGGG ATCTTGTGAA AATACAGATT 005520
005521 CCTTTTAGTA GGTTTGGGAT GAGGAATGAA GGTCTTCATC TCTCAAATCT CCCAGGTGAT GTGGATGCTG CCAGTCCATC 005600
005601 GACCACACTT TGAGTTGGGA GATTCTACAT CTTTTGAGAA ATATCCACAC TGAAGCCTAT ACTCTTAAAC TTTCAAAGAC 005680
005681 TCTGTGTTCA TGTCTGTGTT CTGCAAGAAT TTTTTCTTTT AAGAAATAAA CTGCATAAAG TAAAATCAGA AAACCATAAC 005760
005761 ACTGGTTTTC CAAATTTGCC ACAAATACTG TAATACTCTG TAGAGTAAAA TGCAAAGATT ATTCCTGTTA CAAGTTTTCT 005840
005841 CTGTATCAAG TGCAGGAAAG GAACATGGGT AGAGTCATGT ACCATTCTTA TCAGTCAGGA GATGACACGT GGTAAATTTC 005920
005921 TCTTCTTGAT TTTCCTCTTG ATTATACTCA CATAAGGGAG CTCCATTTGG TAACAAAGAT GAAATTCTGT TCACAGTTAA 006000
006001 CAAGAATTTA GCAACTTCTT GCTTGGCAAA ATCTGAGACA ACCTTACAAA AACATCCTAC ATTAAATTCA GAATTTTGGG 006080
006081 TAGCTGCATA AGCTGAAGAT TATGGAAAAC CTGAGCTGAA AATGGCACCT GGATCTGTAA CTTCTTGTCT TGAACTCTTT 006160
006161 TTTGAGCTTT ATTCTGTGAG AGATCTTCCC CTACAGTGAT TTTTTCTGTT TCTCCTCAGT CGCTGGGGTC TCAGTAAGGG 006240
006241 GTGGAGGATT GGTGTAAATG AGACAGTCAC ATAAATTGTC TAATTTGAGC ATGCCAAGTG ATTTTTGTCA GCCTCTTTTG 006320
006321 GTCATAAAAT TTTGGTATAG CTATTGTGAA ATATAGTGTC ATAAATTTGT CATAAGCCAT TAATGAAGGA AGAGAAGCAG 006400
006401 AAATTTATTT CTGTGGGAAT GCACTCAAAT ATCAAGCAGA TGGTGTTCTA CAACATTTAT TTGGGAAAAT GTGTATCTGT 006480
006481 TACATAATCT GAAATATGTC TTTTTCACAT TTAAAAATAT TTGGGTCATG ATTTAGAGTT TTTATTGGAT TGTTTTTTAA 006560
006561 ACTGAGAGGA AGAAGAAAGG TAATTGTATT TTAAAACATT TGACATGTTA CTAATAAAAT TTTATTTCTG GTGAA
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Predicted Small Protein

Name NONHSAT037288_smProtein_3089:3304
Length 72
Molecular weight 8096.2635
Aromaticity 0.140845070423
Instability index 46.9985915493
Isoelectric point 8.63629150391
Runs 9
Runs residual 0.0217939214233
Runs probability 0.0551924473492
Amino acid sequence MTSLTEFSHLYIHTSRRNCLKNQCFFFFLSSSVHVQNVQVCYIGIHVPWWFAAPINLSST
LGISPNAIPPQ
Secondary structure LLLLLLLEEEEEELLLLLLLLLEEEEEEEELLEEEEEEEEEEEEEEELHHHLLLLLLLLL
LLLLLLLLLLL
PRMN LLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLHHHHHHHHHHHHHHHHHHL
LLLLLLLLLLL
PiMo iiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTooooTTTTTTTTTTTTTTTTTTi
iiiiiiiiiii