NONHSAT037456
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT037456 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1698 nt |
Genomic location |
chr14+:68081646..68083343 |
Exon number |
1 |
Exons |
68081646..68083343 |
Genome context |
|
Sequence |
000001 atcacaatgg gagctcataa ataagaaagt atttacaccc cagaaatcag caaacctgac aaTTGTGTCT TACTTATTCC 000080
000081 CACTCCCTCA CAGTTCCCCA CCCCACAACT CCCAGCAACC TATTAAGGGA TAGAGTGTGT GTTGGCAGCC ACATGATTAA 000160 000161 AGGAAAGAGG CCAAATCTCT AGATCCTCCT ACAAAGGAAG AAGAAAAATA GAGCAAGCTG GTTTGAACCT GAGAAGGGGT 000240 000241 CCTAGAGCTA TGCACTAACA GGGTACAAGT TTTAAAGTAA ATTTTTAAAC TTAACTCATT CTTTATGACT TTAGAATTTT 000320 000321 ATTTTTGAAA ACAGATTTTT AAATTAAATG CCGGTTCTGA AAATAAAAGC AGGTATTCAT TTTCAACTTT GGGGTTTGTT 000400 000401 TTTTGTTTTG CTTTGAGTTG CTGTTTTATG AACTTTGGGG TTTTAAAAAT GAATTATAGG CAGTACATTG AGCTCCATAA 000480 000481 AGACAGTGCC GGGGCAAGTG AGAGCCGGAT GGGCCCTAGG CAACTCTGTG CCTCGCTGAG GAAAAATAAC TAGACATAGG 000560 000561 CAAAGGAGAT CTTAAAAAGC CAAGAGGCAA AATGCCATCG TATGTATTTT GTGTGCAAAC TTGTCCGGAG GAGCGTAAGA 000640 000641 AGAAACACCC AGATGCTTCA GTCAACTTCT CAGAGTTTTC TAAGAAGTGC TTAGTGAGGG GGAAGACCAT GTCTGCTAAA 000720 000721 GAGAAAGGAC AATTTGAAGC TATGGCAAGG GCAGACAAGG CCCGTTACGA AAGAGAAATG AAAACATATA TCCCTCCTAA 000800 000801 AGGGGAGACA AAAAAAGTTT AAGGATCCCA ATGCACCCCA GAGGTCTCCT TCAGCCTTTT TCTTGTTCTG TTCTGCGTGT 000880 000881 GGCCCAAAAG TCAAAAGAGA ACATTCTGGC CTGTCCATTG GTGATTCGGC GAAGAAACTG GGAGGGATGT GGAATAACAC 000960 000961 TGCTGCAGAT GACAAGCAGC CTTAAAAAGA AGTCTGCAAA GCTGAAGGAA AAATACAGAA AGGATACTGC TACATATTGA 001040 001041 GCTAAAGGAA AGTCTGATGC AGCCAAAAAG GGAGTTGTTG AGGCTGAAAA AAGCaagaaa aagaaagaag aggaagaaga 001120 001121 gggagagaat gaggaggagg aaaatgaaga agaTGGTGAT GATGAATAAG TTCGAGTGCA GTTTTTTTTC TTGTCACTAA 001200 001201 AGCATTTAAC CCCCCTGTAC ACAACTCACT CCTTTTAAAG ACAAAAAAAA TTTGAAATGT AAGACTTGTT TTTAAACTGT 001280 001281 ACACTGTCTT TTTTTTTTTT TGTACAGTTA ACACACTACC AAATGTGTCA TTGGATAGCC CTGTCCTGGT GATTTTTTTA 001360 001361 ATAGCCTCCA TACTGTACCT TGTTTGGTAC ACTGTGGGGG CTGTAAATTG ACATGGAAAT TTAAAGCAGG TTTTCGTTGG 001440 001441 TGCACAGCAC AAATTAGTTA TATATGGGAT GGTAGCTTTA CATCTTCAGT TGTCTCTGAT GCAGCTTATA TGAAATAATT 001520 001521 GTTGTTCTGT TAACTGAATA CTCTGTAATT GCAAAAAAAA AAAAAGTTGC AGCTGTTTGT TGACATTCTG AATGCTTCTA 001600 001601 AGTACATACA ATTATTATTA TTATTGTTGT CCTTTTAAAA ATGAACTATA AACTATTTCA GACATGGAAT AAATAATAAT 001680 001681 TTGAATTGTT AAAGATAA |
Predicted Small Protein
Name | NONHSAT037456_smProtein_830:1039 |
Length | 70 |
Molecular weight | 7921.3672 |
Aromaticity | 0.0579710144928 |
Instability index | 65.9942028986 |
Isoelectric point | 10.2522583008 |
Runs | 10 |
Runs residual | 0.00559621179509 |
Runs probability | 0.0436318671613 |
Amino acid sequence | MHPRGLLQPFSCSVLRVAQKSKENILACPLVIRRRNWEGCGITLLQMTSSLKKKSAKLKE KYRKDTATY |
Secondary structure | LLLLLLLLLLLHHHHHHHHHLLLLEELLLEEEEEELLLLLLEEHHHHHHHHHHHHHHHHH HHHHHLLLL |
PRMN | - |
PiMo | - |