NONHSAT037545
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT037545 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1615 nt |
Genomic location |
chr14+:70265065..70266679 |
Exon number |
1 |
Exons |
70265065..70266679 |
Genome context |
|
Sequence |
000001 ttaggctttg tatgtaggac tccagagggc agaataggga ccagggtgtg aaccactgtt gggtggaggt ggggacagat 000080
000081 tttggcttgg tgcaaggaac cacctgaaaa tgagagctct ccaagaatgg CCTTGAGGCC TCTGGAATCC TGCTTGGATA 000160 000161 AGGGTTGGAT GGCAGGATCC ATACATATTG CATCATATCC ATGAAAAGGC TGCTCCCTGG GCTTGCGCGG TGGGCAGCCT 000240 000241 GCGGGGCCGT ATACTGTGGC CCTGGGTGAC ATGAACTTGA AGCCTCTTTT CCTTTGAGAG TCTCTGCTAA TGATTTCCTG 000320 000321 GTGCTTGAGT TGGGCTGGTA TCAAAGGGAG GGCAGGCAGA GGACTGGGCA CTGGATGTGA TGCCTGGACT GAGCGTTCCC 000400 000401 ACAGGGTAGG GTTGAGTCTC AGAGGAGGCT GCTTCCTCTC CCTGGGGCTA ATCAGAAGGG AACAGAGTTG CTAGGGGAGA 000480 000481 ATTATTGATC ACTAACTGAG TACCAGGCAC CATGGGAGGC aaaaaaaata aaaataaata aataaaaaaa actatataat 000560 000561 tCATGTTCCT GTTCTCAGGG ACCTGATGGT CTGTACAAGA CCACAGATGG CCAGATGGTA CACAATGCAA TATGGAAGCA 000640 000641 CGTGAGGGTG GAGGCCATGc agggctgcca ggtacacctg ttcaggttgg gcactacaca atgctaggga cgccactcta 000720 000721 cagatgtctt GTGCAACCGT ACATGAGGCC TTGAAGTCAA AGGGAGACGT TAGGTTTTTA CACATTTGCC TGATGCCAAA 000800 000801 GGGTGAGGAG GAATTGACCA ATATCTGTTA AAGATCAGGG TCTGGGCATG TGTCTATTGT GCACATCCAA AGAGAAGAAG 000880 000881 AGTTCCTATG AACACATTTG TAACCTGGAT TCTAAACCAC GTAGTCTCTA TCAACTCTTC CTCCTCACCT CTTCTCAGGA 000960 000961 ACCCAAAATC CTTCCACCTC CTACTGTGAG TTTTTCCCTT TGAGAAAACA GTTTCTTGCC CTGGCTGCCC CTCCTCCCAC 001040 001041 TCCTTCCCAT TCCCTCTGTT CCTAGCAATG TGACTTTGCA GAGAATGGAA AAATCTCTTC CAGGAACCTG ACACCCTCCA 001120 001121 TTCTTTTCCC CATATCCCCT CAGAATCTAC TCTAATTTAA TACAATTTTG GAAACAGGAA GATCTTTTTG TGTTATGTTA 001200 001201 ATGATACCTG AGAGTTGTTG AGCACATGCT GTGTGATGGA TGCTGTGATT TAAATTACAT ttctttttaa cttttatttt 001280 001281 agatttaggg gtacatgtac aggtttgttg ttacagacaa acttgtgtta tgggggtttg gtgcacggac cactttgtca 001360 001361 cccaggtact aaacatagta cctgatagtt ctgatagtta tttttcctga ttctctccct tcttccaccc tcctccctca 001440 001441 agtaggcccc agtgtctgtt gttcccttct tcgtgcccat tagttctcat tatttaactc ccacttatca gtgggaacat 001520 001521 gcagtatttg gttttctgtt cctgcattag tttgctaaga atattggcct ccagctccat ctgtgttcct gcagagaaca 001600 001601 tgatctcatt ctttt |
Predicted Small Protein
Name | NONHSAT037545_smProtein_887:988 |
Length | 34 |
Molecular weight | 3766.3716 |
Aromaticity | 0.0909090909091 |
Instability index | 49.1 |
Isoelectric point | 11.0003051758 |
Runs | 7 |
Runs residual | 0.0279973649539 |
Runs probability | 0.014119161178 |
Amino acid sequence | MNTFVTWILNHVVSINSSSSPLLRNPKSFHLLL |
Secondary structure | LLEEEHHHHHHEEEELLLLLLLLLLLLLLEELL |
PRMN | - |
PiMo | - |