NONHSAT037592
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT037592 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
2504 nt |
Genomic location |
chr14+:71276648..71283587 |
Exon number |
2 |
Exons |
71276648..71277391,71281828..71283587 |
Genome context |
|
Sequence |
000001 TCCTAAAAGG TAATACTGAG CCTTCATTCA AACTAAAAGG CTGGAAGGGA GGCAGCTGCC TTTGTTTGCC ATGGATGGGT 000080
000081 AGGGGCTGCA CTGAGCAGCA CCGGTGTTCT TCATCCGGCT GCACCCCCAA CAGAGCTCTT TCTTCCCCAG ATCCCTTTTA 000160 000161 CAGTTGGATT CTCCCTCTTG GATCTGGCTC TGCCTTAGTC CGACCTAGAG GGATCAGCTT CGCCCACGCC CACTCTCACC 000240 000241 CGGAACCTTT CATCTCTTAT TGAAGCCTTT TAGGCCCATT GGGATGTTCA TTAGAACTCT GAAAACTACA GTTCTCCCCT 000320 000321 TTATGAGGAC TGCACCACAG CTCGCCCTCT CCTGGGTTCC GGTAAGAAGA GATTCCAATA CCACTCTTTT TTCAGAATTC 000400 000401 AGAAAGGCAA GAGACCACCT TACTGAGCTT CAAACTGGGG CTGGGAACGC TGCCATGAAT TGGGCTTGGT CTGTCTGAAG 000480 000481 GGAGCCACCT TTTCGACAAT CCTTAGACTT CTTTTGCCTG TTGGAATTAC ACCTTGGATC GTGGCGAAGT CTATAGAGGT 000560 000561 CAGATTAAGA AGAACCAAAG CAGAATAAAC GTAGAACCCG ATGCTGAGTT CACGAGTGAG GACGACCTCT TCCTATATGC 000640 000641 TTTGCTATAC CCTGCGTTTT GAACATTAAG GACGAGATAG GAGGCCCATA ATGTTTCTTC TTGCTTTAAT CCTGTCGTGG 000720 000721 CAACGTTGAC TTCCAGTAAG AAAGCCTGGT TGCAGAGTGA GCCCATGGGA CAGCCCTCTG AAATTATACT GCTTACAACC 000800 000801 ATGCTGAGTC TGCAAGGACT TCGTCCAAGC CTTTCCGTCC AGGACCTCAA ACAGATCCAA TCACAAGAAG AGAGATTTCA 000880 000881 GGAAAGAGAA AATTATTCCT ATCATCGGGg tttttgaaga acatgaaatg actgggaaaa taatcatgtt aagtggaaaa 000960 000961 aaaaaagaaa tctatctgtt gtaattttca aataattttt aaataaattt gaaaaattaa gagaactata tatataatac 001040 001041 attcctaatc ttgtgaaaaa tatatatgca ttaatattat tgaaagaaat atatcaaaag gtgaacagca attatcacca 001120 001121 atctagatta tgagattagg agtgattttt tttctttgtc ctatactatt taatattttc taccattaaa atattctgat 001200 001201 tttctaatta gaaTagtacg ttagacaaag aaggacaaat atcacatgaa ctctcactct cttatggaac agatcttgtg 001280 001281 gaatctaaaa aagttgaact catagaaaaa gaggaaaatg atggttacca gttagaaaaa aggaataagt tcaagagatc 001360 001361 tattgtacac catggtcaat atagttaaca atatatttta tactttaaaa ttgctaaggt agtagatttt aagtgttctc 001440 001441 accacacaaa aaaataagta tgtgaaaagc atatggtaat tagcttgatt taaccacgcc acagtgcata catatgtcaa 001520 001521 aacatcatgt tgtatactat aaatatatac actttttgtc aattttaaaC AGGTTATAAA AAAACATGTT ATTGTTGATA 001600 001601 ATTATGAAAA ATTTTAATGA TGTGGAAATG TGTACAGTAT AATGATAAAT GAAAGAGTAG TAAAAATCCT TATAAAATAT 001680 001681 AATTACAAAT GTGTTGGGTG GATAATATAA AAATCTTAAC AGCTATTTCT GAGCTAAGTG GTGGAGCATG GGTAATTTTT 001760 001761 AGTGCCTTCt gtgtcaggct gttcttgcat tgctatgaag aaatacctgg ccaggcgcgg tggctcacgc ctataatccc 001840 001841 ggcactttgg gaggccaagg cgggtggatc acctgaggtc aggagttcga gaccagcctg gccaacatgg tgaaaccccg 001920 001921 tctctactaa aaatacaaaa attagccagg taaggtggtg cgtgcctgta gttccagctg ctggggaggc tgaggcagga 002000 002001 gaatcgtttg aacccaggag gcggaggttg cagtgagctg agatagcctg ggtaacagac caagactctg tctcaaaaaa 002080 002081 aataaaaata aaaataaaaa agaaatacct gagaaaaggt aatttataaa ggaaagaggt ttaattggct tgcgattctt 002160 002161 caagttttac atgaagcatg gcagcatctg attttaggga ggcctcagga agcttccaat cctggcataa agcaacgagg 002240 002241 agcaggtacg tcacatggcg aaagcagtaa caagagagag agtaacgggg gaggtgccac acccttttaa acaatcacat 002320 002321 ctcatgagaa ctcactatcc tgaagacagc accaagggga tagtgctaaa ccatgcatga aaaatccgcc cccatgatcc 002400 002401 aatcgcctcc caccaggccc cacctcccac attggggatt acaattcaac aagagattgg ggcggggaca gacggccaaa 002480 002481 ctatgtcaCC TTCATTTTAC TTTT |
Predicted Small Protein
Name | NONHSAT037592_smProtein_1688:1912 |
Length | 75 |
Molecular weight | 8331.6291 |
Aromaticity | 0.135135135135 |
Instability index | 61.7824324324 |
Isoelectric point | 6.53131103516 |
Runs | 10 |
Runs residual | 0.00751483190508 |
Runs probability | 0.041653418124 |
Amino acid sequence | MCWVDNIKILTAISELSGGAWVIFSAFCVRLFLHCYEEIPGQARWLTPIIPALWEAKAGG SPEVRSSRPAWPTW |
Secondary structure | LEELLLLLHHHHHHHHLLLLEEEEHHHHHHHHHHHHLLLLLLLLLLLLLHHHHHHHHLLL LLLLLLLLLLLLLL |
PRMN | LLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLLL LLLLLLLLLLLLLL |
PiMo | oooooooooooooooTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiiiiiiiiiiiiii iiiiiiiiiiiiii |